mi4p

1.3

Multiple Imputation for Proteomics

0packages depend

3.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Frederic BertrandFirst published 2021-08-197 releasesCRAN page ↗GitHub ↗

A framework for multiple imputation for proteomics is proposed by Marie Chion, Christine Carapito and Frederic Bertrand (2021) <doi:10.1371/journal.pcbi.1010420>. It is dedicated to dealing with multiple imputation for proteomics.

Install

R (CRAN)pak (dev)Ubuntu (r2u)

install.packages("mi4p")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

pak::pak("mariechion/mi4p")

Development version from mariechion/mi4p. Requires the pak package.

Release

# one-time r2u setup for Ubuntu (noble)

curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash

# then install

sudo apt install r-cran-mi4p

Fast Ubuntu binaries via r2u (no compilation). Run the setup once per machine.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

13OK

Code health

Yes

Tests · ratio 0.09

not tracked

Coverage

100%

Documentation · exports

Yes

Vignettes

Yes

README

Dependencies · direct

Check history

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-02
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-25
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Downloads

3.5K

CRAN downloads in the past year

Rank #11,856 · ~10/day · ~295/mo

Releases R versions

mi4p

Daily download trend is not available in this view yet.

Compare downloads with other packages →

39130 days

89390 days

3.5K1 year

Also on128 r2u27 c2d4u

Source & community

GitHub ↗

Repository stars, issues, and contributor activity are not tracked yet.

Dependencies

Declared dependencies

15 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (7)

emmeans foreach imp4p impute limma mice stringr

LinkingTo (0)

none

Suggests (8)

Biobase knitr R.rsp markdown rmarkdown DAPAR ProteoMM testthat

Enhances (0)

none

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

Code Composition

R 1,756 (54%)Rd 1,326 (40%)Vignettes 197 (6%)

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

26 26 exported

Complexity

4.6 avg / 21 max

Call network

26 nodes / 18 edges

Test coverage has not been measured for this package yet; nodes fall back to a neutral fill.

Call graph

Open call graph →

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Lowest coverage

Per-function coverage is not measured for this package yet.

People & History

People (9)

Maintainer (1)

Frederic Bertrand iD

Maintainer, Author

Authors (2)

Christine Carapito iD

Author

Marie Chion iD

Author

Contributors (6)

Hélène Borges

Contributor

Thomas Burger

Contributor

Quentin Giai-Gianetto

Contributor

Davis McCarthy

Contributor

Gordon Smyth

Contributor

Samuel Wieczorek

Contributor

Release timeline

7 releases. Pick two to compare their code metrics; R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.3Latest
2025-09-20 · current release
R
R 4.5.0 released · 2025-04-11
1.2
2024-10-03 · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.1
2023-03-23 · diff ↗
1.0
2022-06-13 · diff ↗
R
R 4.2.0 released · 2022-04-22
0.9
2022-03-23 · diff ↗
0.8
2022-03-15 · diff ↗
0.7
2021-08-19

Package metadata

First published: 2021-08-19
Total releases: 7 / 5 yrs
License: GPL (>= 2) OSI
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet