R Observatory: Metrics for imp4p version 1.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

imp4p

1.3Package record

Imputation for Proteomics

1packages depend

5.2Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Quentin Giai GianettoCRAN page ↗

Functions to analyse missing value mechanisms and to impute data sets in the context of bottom-up MS-based proteomics.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("imp4p", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-imp4p

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-imp4p

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-imp4p

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 4.6 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-07-01
NOTE11 OK, 2 NOTE2026-06-09
ERROR11 OK, 1 NOTE, 1 ERROR2026-06-08

Show 5 earlier changesHide 5 earlier changes

NOTE11 OK, 2 NOTE2026-05-02
ERROR9 OK, 2 NOTE, 1 ERROR2026-04-25
NOTE12 OK, 2 NOTE2026-04-22
ERROR11 OK, 2 NOTE, 1 ERROR2026-04-18
NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.3

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 28includes a package overview page
Examples that run: 4%1 run in a plain check · 20 only when donttest examples are enabled (R CMD check --as-cran) · 1 never run · 4 hold no code
Exported functions with examples: 96%
Documented parameters: not tracked
Return-value docs: not tracked
Help pages citing references: 96%

How these are measured

Downloads

5.2K

CRAN downloads in the past year

Rank #4,576 · ~14/day · ~437/mo

Releases R versions

Daily download trend is not available in this view yet.

79030 days

1.8K90 days

5.2K1 year

Compare downloads with other packages →

Also on593 r2u2 autocran4K conda_forge169 bioconda79 c2d4u

How downloads are counted

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Installing imp4p adds 132 packages (71 with compiled code, 98 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, bslib 5.6 MB.

Depends (7)

R >= 3.3.0Isostatstruncnorm norm missRanger missMDA

Imports (1)

Rcpp

LinkingTo (1)

Rcpp

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Imports 1

Depends, Imports or LinkingTo, most downloaded first

mi4p

How these are counted

Code & Tests

People & History

People (4)

Quentin Giai Gianetto

Author, Maintainer since 0.1 (2016)

Thomas Burger

Author · added in 1.3

Yohann Coute

Contributor · added in 1.3

Samuel Wieczorek

Contributor · added in 1.3

Releases (13)

Pick two releases to compare their code metrics.

1.3Latest
record
2026-06-24 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
1.2
record
2021-09-02 · diff ↗
R
R 4.1.0 released · 2021-05-18
1.1
record
2021-03-22 · diff ↗
1.0
record
2020-07-28 · diff ↗
R
R 4.0.0 released · 2020-04-24
unarchivedReturned to CRAN
2020-04-15
0.9
record
2020-04-15 · diff ↗
archivedRemoved from CRAN
2020-04-03
check problems were not corrected in time Errors in '\donttest' parts of examples
0.8
record
2019-10-03 · diff ↗
R
R 3.6.0 released · 2019-04-26

Show 10 earlier eventsHide 10 earlier events

0.7
record
2018-08-10 · diff ↗
0.6
record
2018-06-27 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.5
record
2017-12-11 · diff ↗
0.4
record
2017-06-01 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.3
record
2017-04-12 · diff ↗
0.2
record
2016-10-25 · diff ↗
0.1
record
2016-08-18
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-08-18
Total releases: 13 / 10 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.3.0
Download size: 32 KB

Appears in task views

Missing Data Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("imp4p")

Format

Giai Gianetto, Q., Burger, T., Coute, Y., & Wieczorek, S. (2026). imp4p: Imputation for Proteomics (Version 1.3) [Computer software]. https://doi.org/10.32614/CRAN.package.imp4p

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for imp4p version 1.3 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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