R Observatory: Metrics for Morpho version 2.13

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

Morpho

2.13

Calculations and Visualisations Related to Geometric Morphometrics

15packages depend

33.5Kdownloads / year

16.3%test coverage

8/13checks pass

Overview

About

Maintained by Stefan SchlagerFirst published 2013-03-2129 releasesCRAN page ↗GitHub ↗

A toolset for Geometric Morphometrics and mesh processing. This includes (among other stuff) mesh deformations based on reference points, permutation tests, detection of outliers, processing of sliding semi-landmarks and semi-automated surface landmark placement.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("Morpho", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("zarquon42b/Morpho")

Development version from zarquon42b/Morpho. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-morpho

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-Morpho

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-Morpho

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

5NOTE8OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64

Slowest check: 10.1 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.00

16.3%

Coverage · measured lines

100%

Documentation · exports

18

Dependencies · direct

Check history

NOTE2026-07-16
10 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-04-22
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 93%
Documented parameters: 99%
Return-value docs: 89%
References docs: 21%

Downloads

33.5K

CRAN downloads in the past year

Rank #3,040 · ~92/day · ~2.8K/mo

Releases R versions

Daily download trend is not available in this view yet.

1K30 days

4.2K90 days

33.5K1 year

Compare downloads with other packages →

Also on732 r2u17 autocran112 c2d4u

Repository

GitHub ↗ zarquon42b/morpho

53Stars

18Forks

8Open issues

1Open PRs

9Releases

1,731Commits

13Contributors

1,731 commits · Last activity 2026-04-24 · 0% stars, 30d

Stars over time

2025-03-28 · 512026-07-07 · 53

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 1 family in the upstream repository

Checks run against github.com/zarquon42b/morpho on 2026-08-16.

Continuous integration (2)

GitHub ActionsTravis CI

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.2.0

Imports (18)

Rvcg rgl foreachMatrixMASSparalleldoParallel colorRamps RcppgraphicsgrDevicesmethodsstatsutilsjsonlite bezier crayon mclust

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (6)

carlatticeshapes sf testthat DescTools

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

15direct

0indirect

Arothron ETRep RRmorph TestDimorph Toothnroll doolkit evolqg morphomap patternize prWarp pressuRe GeometricMorphometricsMix RRphylo Rvcg nat.templatebrains

Code & Tests

People & History

People (3)

Maintainer (1)

Stefan Schlager

Author, Maintainer, Copyright holder

Authors (1)

Stefan Schlager

Author, Maintainer, Copyright holder

Contributors (1)

Gregory Jefferis

Contributor · added in 2.3.0

Copyright holders (2)

Stefan Schlager

Author, Maintainer, Copyright holder

Dryden Ian

Copyright holder · added in 2.6

Package Timeline

29 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
2.13Latest
2025-09-04 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
2.12
2023-12-06 · diff ↗
R
R 4.3.0 released · 2023-04-21
2.11
2023-01-27 · diff ↗
2.10
2022-09-09 · diff ↗
R
R 4.2.0 released · 2022-04-22
2.9
2021-09-09 · diff ↗
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
2.8
2020-03-09 · diff ↗
2.7
2019-05-16 · diff ↗
R
R 3.6.0 released · 2019-04-26
2.6
2018-04-24 · diff ↗

Show 28 earlier events

R
R 3.5.0 released · 2018-04-23
2.5.1
2017-04-21 · diff ↗
R
R 3.4.0 released · 2017-04-21
2.5
2017-04-05 · diff ↗
2.4.1.1
2016-09-13 · diff ↗
2.4
2016-08-01 · diff ↗
R
R 3.3.0 released · 2016-05-03
2.3.1.1
2016-01-22 · diff ↗
2.3.1
2015-12-15 · diff ↗
2.3.0
2015-06-23 · diff ↗
R
R 3.2.0 released · 2015-04-16
2.2
2014-12-16 · diff ↗
2.1
2014-09-25 · diff ↗
2.0.3-1
2014-05-13 · diff ↗
R
R 3.1.0 released · 2014-04-10
3.0.3
2014-02-24 · diff ↗
2.0.2
2014-02-24 · diff ↗
2.0.1
2014-02-07 · diff ↗
2.0
2014-02-06 · diff ↗
1.0-1
2013-11-04 · diff ↗
3.0.2
2013-08-02 · diff ↗
0.25-1
2013-08-02 · diff ↗
0.25
2013-07-24 · diff ↗
0.24.1
2013-06-17 · diff ↗
R
R 3.0.0 released · 2013-04-03
3.0.0
2013-03-21 · diff ↗
0.23.3
2013-03-21
R
R 2.15.0 released · 2012-03-30

Package metadata

First published: 2013-03-21
Total releases: 29 / 13 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.2.0
Bundled data: 2.0 MB / 3 files
Download size: 2.8 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Anomaly Detection Medical Image Analysis

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("Morpho")

Format

Schlager, S., Ian, D., & Jefferis, G. (2025). Morpho: Calculations and Visualisations Related to Geometric Morphometrics (Version 2.13) [Computer software]. https://doi.org/10.32614/CRAN.package.Morpho

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for Morpho version 2.13 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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