R Observatory: Metrics for GeometricMorphometricsMix version 0.6.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

GeometricMorphometricsMix

0.6.1.1

Heterogeneous Methods for Shape and Other Multidimensional Data

0packages depend

2.1Kdownloads / year

35.2%test coverage

13/13checks pass

Overview

About

Maintained by Carmelo FrucianoFirst published 2026-01-272 releasesCRAN page ↗

Tools for geometric morphometric analyses and multidimensional data. Implements methods for morphological disparity analysis using bootstrap and rarefaction, as reviewed in Foote (1997) doi:10.1146/annurev.ecolsys.28.1.129. Includes integration and modularity testing, following Fruciano et al. (2013) doi:10.1371/journal.pone.0069376, using Escoufier's RV coefficient as test statistic as well as two-block partial least squares - PLS, Rohlf and Corti (2000) doi:10.1080/106351500750049806. Also includes vector angle comparisons, orthogonal projection for data correction (Burnaby (1966) doi:10.2307/2528217; Fruciano (2016) doi:10.1007/s00427-016-0537-4), and parallel analysis for dimensionality reduction (Buja and Eyuboglu (1992) doi:10.1207/s15327906mbr2704_2).

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("GeometricMorphometricsMix", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-geometricmorphometricsmix

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-GeometricMorphometricsMix

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-GeometricMorphometricsMix

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 3.3 min · r-oldrel-macos-x86_64

Code health

Yes

Tests · ratio 0.27

35.2%

Coverage · measured lines

100%

Documentation · exports

4

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-09
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 907 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 70%
Return-value docs: 100%
References docs: 56%

Downloads

2.1K

CRAN downloads in the past year

Rank #9,666 · ~6/day · ~177/mo

Releases R versions

Daily download trend is not available in this view yet.

16430 days

97990 days

2.1K1 year

Compare downloads with other packages →

Also on49 r2u18 autocran

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (3)

R >= 3.5.0statscorpcor

Imports (2)

methodsmclust

LinkingTo (0)

none

Suggests (17)

ape Morphoutilsgeometry nlshrink lmfMASSclusterGeneration ggplot2 Rmpfr knitr rmarkdown phytools mvMORPH testthat future future.apply

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Carmelo Fruciano

Author, Maintainer

Authors (1)

Carmelo Fruciano

Author, Maintainer

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.6.1.1Latest
2026-04-18 · current release · diff ↗
0.6.0.1
2026-03-10
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-01-27
Total releases: 2 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.5.0
Bundled data: 26 KB / 2 files
Download size: 156 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("GeometricMorphometricsMix")

Format

Fruciano, C. (2026). GeometricMorphometricsMix: Heterogeneous Methods for Shape and Other Multidimensional Data (Version 0.6.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.GeometricMorphometricsMix

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for GeometricMorphometricsMix version 0.6.1.1 [Data set]. HJJB, LLC. Data release v2026-08-16. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-16, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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