December 2014 in CRAN

Part of Q4 2014 and 2014.

Final

New packages

396

Updated

Archived

Downloads

New packages (60+)

RegressionFactory Expander Functions for Generating Full Gradient and Hessian from Single-Slot and Multi-Slot Base Distributions	2014-12-01
lintr A 'Linter' for R Code	2014-12-01
mipfp Multidimensional Iterative Proportional Fitting and Alternative Models	2014-12-01
occ Estimation of PET Neuroreceptor Occupancies	2014-12-01
radar Fundamental Formulas for Radar	2014-12-02
ARTool Aligned Rank Transform	2014-12-02
choroplethrAdmin1 Contains an Administrative-Level-1 Map of the World	2014-12-02
hnp Half-Normal Plots with Simulation Envelopes	2014-12-02
netgsa Network-Based Gene Set Analysis	2014-12-02
retistruct Retinal Reconstruction Program	2014-12-02
rncl An Interface to the Nexus Class Library	2014-12-02
secrlinear Spatially Explicit Capture-Recapture for Linear Habitats	2014-12-02
ClimClass Climate Classification According to Several Indices	2014-12-03
textreg n-Gram Text Regression, aka Concise Comparative Summarization	2014-12-04
acid Analysing Conditional Income Distributions	2014-12-05
archiDART Plant Root System Architecture Analysis Using DART and RSML Files	2014-12-05
rstackdeque Persistent Fast Amortized Stack and Queue Data Structures	2014-12-05
NISTunits Fundamental Physical Constants and Unit Conversions from NIST	2014-12-06
knockoff The Knockoff Filter for Controlled Variable Selection	2014-12-06
rtdists Response Time Distributions	2014-12-07
V8 Embedded JavaScript and WebAssembly Engine for R	2014-12-08
thermocouple Temperature Measurement with Thermocouples, RTD and IC Sensors	2014-12-08
GeneticSubsetter Identify Favorable Subsets of Germplasm Collections	2014-12-09
htmlwidgets HTML Widgets for R	2014-12-09
urltools Vectorised Tools for URL Handling and Parsing	2014-12-09
filenamer Easy Management of File Names	2014-12-10
jomo Multilevel Joint Modelling Multiple Imputation	2014-12-10
EffectTreat Prediction of Therapeutic Success	2014-12-11
medflex Flexible Mediation Analysis Using Natural Effect Models	2014-12-11
InvariantCausalPrediction Invariant Causal Prediction	2014-12-12
gimme Group Iterative Multiple Model Estimation	2014-12-12
qqtest Self Calibrating Quantile-Quantile Plots for Visual Testing	2014-12-14
rodd Optimal Discriminating Designs	2014-12-14
ztable Zebra-Striped Tables in LaTeX and HTML Formats	2014-12-15
BinNonNor Data Generation with Binary and Continuous Non-Normal Components	2014-12-16
NeuralNetTools Visualization and Analysis Tools for Neural Networks	2014-12-16
PRROC Precision-Recall and ROC Curves for Weighted and Unweighted Data	2014-12-16
WaveletComp Computational Wavelet Analysis	2014-12-16
leaderCluster Leader Clustering Algorithm	2014-12-16
networkD3 D3 JavaScript Network Graphs from R	2014-12-16
FPDclustering PD-Clustering and Related Methods	2014-12-17
GPareto Gaussian Processes for Pareto Front Estimation and Optimization	2014-12-17
RcmdrPlugin.RMTCJags R MTC Jags 'Rcmdr' Plugin	2014-12-17
ibmdbR IBM in-Database Analytics for R	2014-12-17
selfingTree Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing	2014-12-18
biogram N-Gram Analysis of Biological Sequences	2014-12-19
nlsem Fitting Structural Equation Mixture Models	2014-12-19
orgR Analyse Text Files Created by Emacs' Org mode	2014-12-20
SCEPtERbinary Stellar CharactEristics Pisa Estimation gRid for Binary Systems	2014-12-20
aplore3 Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013)	2014-12-21
htmlTable Advanced Tables for Markdown/HTML	2014-12-21
rDEA Robust Data Envelopment Analysis (DEA) for R	2014-12-21
Rdsdp R Interface to DSDP Semidefinite Programming Library	2014-12-22
Deriv Symbolic Differentiation	2014-12-23
SoundexBR Phonetic-Coding for Portuguese	2014-12-23
dygraphs Interface to 'Dygraphs' Interactive Time Series Charting Library	2014-12-23
reconstructr Session Reconstruction and Analysis	2014-12-23
manipulate Interactive Plots for RStudio	2014-12-24
historydata Data Sets for Historians	2014-12-24
multibiplotGUI Multibiplot Analysis in R	2014-12-24

Archived / removed

Why

3 it depends on 'mvpart', which was archived
2 maintainer address <christian.bender@tron-mainz.de> bounced
2 maintainer address <tristan.senga-kiesse@lcpc.fr> bounced
1 . The package 'nacopula' has been merged with package 'copula', so please use that instead
1 UBSAN errors were not corrected after months of reports and two deadlines
1 after 20 months of deprecation in favour of 'randomForestSRC', by the maintainer
1 maintainer address <ander_wilson@ncsu.edu> bounced
1 maintainer address <aredd@stat.tamu.edu> bounced

easingr the service it used is no longer available	2014-12-29
Statomica	2014-12-26
lmbc the maintainer did not respond to a request to get rid of a dependency that was archived	2014-12-22
mseq the maintainer was unable to follow the procedures to fix the maintainer email address	2014-12-22
phyext maintainer address <stack@psu.edu> bounced	2014-12-22
HIBAG repeated policy violations by the maintainer. This package is now available from Bioconductor only, see <https://www.bioconductor.org/packages/release/bioc/html/HIBAG.html>	2014-12-20
PKmodelFinder requested by the maintainer <lee.eunk@ewha.ac.kr>	2014-12-20
SCEPtERextras requested by the maintainer <mattdell@fastmail.fm>	2014-12-20
gdsfmt repeated policy violations by the maintainer. This package is now available from Bioconductor only, see <https://www.bioconductor.org/packages/release/bioc/html/gdsfmt.html>	2014-12-20
KsPlot it depends on 'mvpart', which was archived	2014-12-13
MVPARTwrap it depends on 'mvpart', which was archived	2014-12-13
Tampo it depends on 'mvpart', which was archived	2014-12-13
mvpart UBSAN errors were not corrected after months of reports and two deadlines	2014-12-13
DierckxSpline the request of the maintainer	2014-12-09
BayesPen maintainer address <ander_wilson@ncsu.edu> bounced	2014-12-07
ENA maintainer address <guanghua.xiao@utsouthwestern.edu> bounced	2014-12-07
EpiResTest segfaulted by using memory after it was freed, and compared floating-point quantities without a tolerance	2014-12-07
FPDC maintainer address <ctortora@uoguelph.ca> bounced	2014-12-07
MVpower maintainer address <yguo@bg-medicine.com> bounced	2014-12-07
MiClip maintainer address <tao.wang@utsouthwestern.edu> bounced	2014-12-07
OneHandClapping maintainer address <duemcke@genzentrum.lmu.de> bounced	2014-12-07
PSMix maintainer address <jgama@abo.fi> bounced	2014-12-07
RECSO maintainer address <tsofer@hsph.harvard.edu> bounced	2014-12-07
SDBP maintainer address <ren_az@hotmail.co.jp> bounced	2014-12-07
TRIANG maintainer address <tristan.senga-kiesse@lcpc.fr> bounced	2014-12-07
TRIANGG maintainer address <tristan.senga-kiesse@lcpc.fr> bounced	2014-12-07
TSAgg maintainer address <jason.lessels@sydney.edu.au> bounced	2014-12-07
avgrankoverlap maintainer address <sunor@stanford.edu> bounced	2014-12-07
bootfs maintainer address <christian.bender@tron-mainz.de> bounced	2014-12-07
capme maintainer address <jichun@temple.edu> bounced	2014-12-07
changeLOS maintainer address <arthur.allignol@fdm.uni-freiburg.de> bounced	2014-12-07
comorbidities maintainer address <pbgerrard@partners.org> bounced	2014-12-07
complex.surv.dat.sim maintainer address <david.morina@ctns.cat> bounced	2014-12-07
ddepn maintainer address <christian.bender@tron-mainz.de> bounced	2014-12-07
factas maintainer address <romain.bar@univ-lorraine.fr> bounced	2014-12-07
gcExplorer maintainer address <scharl@ci.tuwien.ac.at> bounced	2014-12-07
glmperm maintainer address <w.werft@dkfz-heidelberg.de> bounced	2014-12-07
iScreen maintainer address <rui.zhong@utsouthwestern.edu> bounced	2014-12-07
malaria.em maintainer address <xli@bg-medicine.com> bounced	2014-12-07
margie maintainer address <elisa.loza@rothamsted.ac.uk> bounced	2014-12-07
marginalmodelplots maintainer address <aredd@stat.tamu.edu> bounced	2014-12-07
mixedQF maintainer address <jleger@agroparistech.fr> bounced	2014-12-07
review maintainer address <timb@metrumrg.com> bounced	2014-12-07
waldwolf maintainer address <contato@jodavidferreira.com> bounced	2014-12-07
AWS.tools requested by the maintainer <armstrong.whit@gmail.com>	2014-12-05
PKtools requested by the maintainer <sblanchard@coh.org>	2014-12-05
fork was not portable even to all the tested Unix platforms	2014-12-05
randomSurvivalForest after 20 months of deprecation in favour of 'randomForestSRC', by the maintainer	2014-12-04
nacopula . The package 'nacopula' has been merged with package 'copula', so please use that instead	2014-12-02

Downloads

Total downloads

-39.1%

vs prior period

Notable

Major version jumps

CLME 1.0-1→2.0-1 riskRegression 0.0.8→1.0.9 RNeXML 1.1.3→2.0.0 Boruta 3.1.0→4.0.0 arulesViz 0.1-9→1.0-0 NPMLEcmprsk 1.0→2.0 earth 3.2-7→4.0.0 CARBayes 3.0→4.0 abctools 0.3-2→1.0 GPLTR 0.95→1.1 streamMOA 0.1-1→1.0-0 OPI 1.6→2.1 adabag 3.2→4.0 convevol 0.1-1→1.0 raters 1.1→2.0 CORE 2.0→3.0 ParDNAcopy 1.3→2.0 CNprep 1.0→2.0

First-time CRAN authors

Florent Angly Johan Barthelemy ×2 Emmanuel Ferdman Mohammad Namazi-Rad Joaquim Radua ×8 Alexander Rosenstock ×2 Thomas Suesse Lisa A. Elkin Clarice Garcia Borges Demetrio ×3 Nick Guy Michael Hellstern ×2 James J. Higgins Mark Holder Paul Lewis Daniel Lyngholm Francois Michonneau ×5 Jan Okul Ali Shojaie ×2 Jacob O. Wobbrock ×2 Kun Yue