Skip to content

synapter

Bioc removed

Label-free data analysis pipeline for optimal identification and quantitation

v2.32.0 · GPL-2

Release Lineage

Entered 2.11 · Oct 3, 2012

Removed after 3.21 · Apr 16, 2025

1.0 In 26 of 49 releases 3.23

Description

The synapter package provides functionality to reanalyse label-free proteomics data acquired on a Synapt G2 mass spectrometer. One or several runs, possibly processed with additional ion mobility separation to increase identification accuracy can be combined to other quantitation files to maximise identification and quantitation accuracy.

Advisories

None published for Bioconductor

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Available on

CRANr2uBioconductorautoCRANCOPR

Depended on by (1)

Bioconductor (1)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("synapter")
Gatto, L., Gibb, S., Bond, N. J., & Shliaha, P. V. (2025). synapter: Label-free data analysis pipeline for optimal identification and quantitation (Version 2.32.0) [Computer software]. https://bioconductor.org/packages/synapter

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for synapter version 2.32.0 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →

Privacy choices

These apply to this browser and are stored on this device only. Nothing about your choice is sent to us.

Read the privacy policy