splicelogic
Bioc currentsplicelogic: differential transcripts to splice events
Release Lineage
Entered 3.23 · Apr 29, 2026
Current · Requires R 4.6
Description
Translate differential transcript usage results into discrete splice events.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
38 16 exported
Complexity
2.2 avg / 8 max
Call network
38 nodes / 45 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,306
Files
26
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
16
Internal functions
22
Recent export changes
Testing
Has tests
Yes
Test-to-code ratio
0.30
testthat edition
3
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.5.0
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
1
First release
2026-05-13
Latest release
2026-05-13
Avg cadence
–
Cold removal rate
–
Dep drift
0
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 7includes a package overview page
- Examples that run
- 100%6 run in a plain check
- Exported functions with examples
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- Help pages citing references
- 0%
Repository practices
6 development-tooling and community-health practices detected across 3 families in the upstream repository
Checks run against github.com/thelovelab/splicelogic on 2026-10-11.
The R CMD check workflow runs on Linux and macOS, and on R-devel
GitHub Pages site last deployed 2026-09-25 · The repository has a site deploy workflow
pkgdown site last built 2026-09-25
Datasets
| Name | Class | Size | Also in |
|---|---|---|---|
| dtu_table | data.frame | 49 × 5 | No other package |
| exons_mcols | data.frame | 601 × 4 | No other package |
Topics
People
- Beatriz Campillo author maintainer
- NIH NHGRI funder
- Wellcome Trust funder
- Michael Love author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("splicelogic")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.