rpx
Bioc currentR Interface to the ProteomeXchange Repository
Release Lineage
Entered 2.14 · Apr 14, 2014
Current · Requires R 4.6
Description
The rpx package implements an interface to proteomics data submitted to the ProteomeXchange consortium.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
29 14 exported
Complexity
2.1 avg / 8 max
Call network
29 nodes / 16 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
2,070
Files
27
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
15
Internal functions
15
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.08
testthat edition
–
CI present
Yes
CI type
["github-actions"]
PR gated
Yes
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5.0
System requirements
–
C++ standard
–
License
GPL-2
License flags
SPDX valid, OSI approved
History
Versions
25
First release
2014-07-15
Latest release
2026-04-28
Avg cadence
187 days
Cold removal rate
100%
Dep drift
7
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 60%
Topics
Depended on by (5)
Bioconductor (5)
People
- Laurent Gatto author maintainer