ncdfFlow
Bioc currentncdfFlow: A package that provides HDF5 based storage for flow cytometry data.
Release Lineage
Entered 2.9 · Nov 1, 2011
Current · Requires R 4.6
Description
Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
31 7 exported
Complexity
5.7 avg / 23 max
Call network
31 nodes / 13 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
5,250
Files
53
Compiled share
13.2%
Has compiled src
Yes
Language breakdown
API
Exported functions
13
Internal functions
9
Testing
Has tests
Yes
Test-to-code ratio
0.29
testthat edition
–
Docs
Roxygen coverage
92.3%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
6
Dep constraint coverage
16.7%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
2.14.0
System requirements
–
C++ standard
C++11
License
AGPL-3.0-only
License flags
not SPDX, not OSI
History
Versions
30
First release
2012-01-10
Latest release
2026-04-28
Avg cadence
181 days
Cold removal rate
100%
Dep drift
7
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 21includes a package overview page
- Examples that run
- 92%12 run in a plain check · 1 never run
- Exported functions with examples
- 89%
- Documented parameters
- 97%
- Return-value docs
- 67%
- Help pages citing references
- 0%
Repository practices
Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.
2 practices detected in the Bioconductor git repository
Topics
Depended on by (5)
Bioconductor (5)
People (from the free-text Author field)
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("ncdfFlow")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.