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iSEEhex

Bioc current

iSEE extension for summarising data points in hexagonal bins

v1.14.0 · Package record · software · Artistic-2.0

Release Lineage

Entered 3.16 · Nov 2, 2022

Current · Requires R 4.6

1.0 In 8 of 49 releases 3.23

Description

This package provides panels summarising data points in hexagonal bins for `iSEE`. It is part of `iSEEu`, the iSEE universe of panels that extend the `iSEE` package.

Advisories

None published for Bioconductor

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

3 1 exported

Complexity

3 avg / 4 max

Call network

3 nodes / 1 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

909

Files

16

Compiled share

0%

Has compiled src

No

Language breakdown

R 440 (48.4%)Tests 208 (22.9%)Docs 135 (14.9%)Vignettes 126 (13.9%)

API

Exported functions

1

Internal functions

2

Testing

Has tests

Yes

Test-to-code ratio

0.47

testthat edition

3

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

–

System requirements

–

C++ standard

–

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

8

First release

2022-11-01

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

–

Dep drift

0

LOC over versions

v3.16: 908 LOCv3.17: 908 LOCv3.18: 908 LOCv3.19: 908 LOCv3.20: 909 LOCv3.21: 909 LOCv3.22: 909 LOCv3.23: 909 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

In the Bioconductor 3.23 release
READMEYes · 300 wordsVignettesYes · 1 · dynamicNEWSYes · 100% structuredCitation fileYes · cites a publication
Help pages
2 (1 internal)includes a package overview page
Examples that run
100%1 run in a plain check
Exported functions with examples
100%
Documented parameters
not tracked
Return-value docs
0%
Help pages citing references
0%
Vignettes (1)

Repository practices

Upstream repositoryBeta

11 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/isee/iseehex on 2026-10-11.

Continuous integration (2)
GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Governance and community (4)
Code of conductContributing guideIssue templatesSupport guide
Docs source (4)
README.Rmdpkgdown

GitHub Pages site last deployed 2024-10-18 · The repository has a site deploy workflow

Coverage (1)
Coverage reporting (Codecov)
How this is detected·Detection ruleset v3 (2026-09-26)

Topics

Maintainer
Kevin Rue-Albrecht

Available on

CRANr2uBioconductorautoCRANCOPR

Depended on by (1)

Bioconductor (1)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("iSEEhex")

The package provides a citation file that builds its entry when R runs it. Run citation() to see it.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for iSEEhex version 1.14.0 [Data set]. HJJB, LLC. Data release v2026-10-19. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-19, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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