diffcoexp
Bioc currentDifferential Co-expression Analysis
Release Lineage
Entered 3.7 · May 1, 2018
Current · Requires R 4.6
Description
A tool for the identification of differentially coexpressed links (DCLs) and differentially coexpressed genes (DCGs). DCLs are gene pairs with significantly different correlation coefficients under two conditions. DCGs are genes with significantly more DCLs than by chance.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
5 3 exported
Complexity
7 avg / 22 max
Call network
5 nodes / 4 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
941
Files
17
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
3
Internal functions
1
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5
System requirements
–
C++ standard
–
License
GPL (>2)
License flags
not SPDX, not OSI
History
Versions
17
First release
2018-04-30
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 82%
- Return-value docs
- 100%
- References docs
- 20%
Topics
Depended on by (1)
Bioconductor (1)
People
Wenbin Wei
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("diffcoexp")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.