alabaster.sce
Bioc currentLoad and Save SingleCellExperiment from File
Release Lineage
Entered 3.17 · Apr 26, 2023
Current · Requires R 4.6
Description
Save SingleCellExperiment into file artifacts, and load them back into memory. This is a more portable alternative to serialization of such objects into RDS files. Each artifact is associated with metadata for further interpretation; downstream applications can enrich this metadata with context-specific properties.
Code
Structure
Lines of code
619
Files
15
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
2
Internal functions
2
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.55
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
100%
\dontrun example ratio
0%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
No
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
7
First release
2023-04-25
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Topics
Depended on by (4)
Bioconductor (4)
People
- Aaron Lun author maintainer