XBSeq
Bioc removedTest for differential expression for RNA-seq data
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Entered 3.2 · Oct 14, 2015
Removed after 3.13 · May 20, 2021
Description
We developed a novel algorithm, XBSeq, where a statistical model was established based on the assumption that observed signals are the convolution of true expression signals and sequencing noises. The mapped reads in non-exonic regions are considered as sequencing noises, which follows a Poisson distribution. Given measureable observed and noise signals from RNA-seq data, true expression signals, assuming governed by the negative binomial distribution, can be delineated and thus the accurate detection of differential expressed genes.
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