Skip to content

REDseq

Bioc current

Analysis of high-throughput sequencing data processed by restriction enzyme digestion

v1.58.0 · software · GPL (>=2)
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 2.9 · Nov 1, 2011

Current · Requires R 4.6

1.0 In 30 of 49 releases 3.23

Description

The package includes functions to build restriction enzyme cut site (RECS) map, distribute mapped sequences on the map with five different approaches, find enriched/depleted RECSs for a sample, and identify differentially enriched/depleted RECSs between samples.

Call graph

Open call graph →

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Software › Technology › Sequencing
Software › BiologicalQuestion › SequenceMatching
Software › WorkflowStep › Preprocessing

People

Lihua Julie Zhu