MetaScope

Bioc current

Tools and functions for preprocessing 16S and metagenomic sequencing microbiome data

v2.0.0 · experiment · GPL (>= 3)

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Release Lineage

Entered 3.17 · Apr 26, 2023

Current · Requires R 4.6

1.0 In 7 of 49 releases 3.23

Description

This package contains tools and methods for preprocessing microbiome data. Functionality includes library generation, demultiplexing, alignment, and microbe identification. It is in part an R translation of the PathoScope 2.0 pipeline.

Code

Code metrics have not been computed for this package yet.

Topics

ExperimentData › TechnologyData › SequencingData › MicrobiomeData

ExperimentData › ReproducibleResearch

ExperimentData › TechnologyData › SequencingData

People

Sean Lu author maintainer
W. Evan Johnson author
Aubrey Odom author
Rahul Varki author