W. Evan Johnson

10 Bioconductor packages On Bioconductor since Apr 2014 (12 years) · last active 3 years ago

Bioconductor Packages

10 packages

Package	Title	Category	Version
ASSIGN Bioc	Adaptive Signature Selection and InteGratioN (ASSIGN)	software	1.48.0
BatchQC Bioc	Batch Effects Quality Control Software	software	2.8.3
MetaScope Bioc	Tools and functions for preprocessing 16S and metagenomic sequencing microbiome data	experiment	2.0.0
PathoStat Bioc	PathoStat Statistical Microbiome Analysis Package	software	1.38.0
SCAN.UPC Bioc	Single-channel array normalization (SCAN) and Universal exPression Codes (UPC)	software	2.54.0
TBSignatureProfiler Bioc	Profile RNA-Seq Data Using TB Pathway Signatures	software	1.24.0
animalcules Bioc	Interactive microbiome analysis toolkit	software	1.28.0
curatedTBData Bioc	Curation of existing tuberculosis transcriptomic studies	experiment	2.8.0
singleCellTK Bioc	Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data	software	2.22.0
sva Bioc	Surrogate Variable Analysis	software	3.60.0

Package repositories

Repositories of packages W. Evan Johnson maintains where an AI coding tool was found. Other people commit to these repositories too, so each line describes the repository, not W. Evan Johnson's own work.

wejlab/animalcules ↗(organization: wejlab)
Packages: animalcules
- Claude Codefirst seen on or before 2026-09-18
  Commits: at least 2 crediting it in the message

Finding nothing does not mean no tool was used. How this is detected.