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HCATonsilData

Bioc current

Provide programmatic access to the tonsil cell atlas datasets

v1.10.0 · experiment · MIT + file LICENSE
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Release Lineage

Entered 3.18 · Oct 25, 2023

Current · Requires R 4.6

1.0 In 6 of 49 releases 3.23

Description

This package provides access to the scRNA-seq, scATAC-seq, multiome, CITE-seq and spatial transcriptomics (Visium) data generated by the tonsil cell atlas in the context of the Human Cell Atlas (HCA). The data is provided via the Bioconductor project in the form of SingleCellExperiments. Additionally, information on the whole compendium of identified cell types is provided in form of a glossary.

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Topics

ExperimentData › TechnologyData › SequencingData › SingleCellData
ExperimentData
ExperimentData › TechnologyData › SequencingData › RNASeqData
ExperimentData › PackageTypeData › ExperimentHub
ExperimentData › AssayDomainData › ExpressionData
ExperimentData › TechnologyData › SequencingData › SpatialData

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