EnrichedHeatmap
Bioc currentMaking Enriched Heatmaps
Release Lineage
Entered 3.2 · Oct 14, 2015
Current · Requires R 4.6
Description
Enriched heatmap is a special type of heatmap which visualizes the enrichment of genomic signals on specific target regions. Here we implement enriched heatmap by ComplexHeatmap package. Since this type of heatmap is just a normal heatmap but with some special settings, with the functionality of ComplexHeatmap, it would be much easier to customize the heatmap as well as concatenating to a list of heatmaps to show correspondance between different data sources.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
28 16 exported
Complexity
13.3 avg / 83 max
Call network
28 nodes / 19 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
5,541
Files
188
Compiled share
1.3%
Has compiled src
Yes
Language breakdown
API
Exported functions
16
Internal functions
8
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.04
testthat edition
–
CI present
Yes
CI type
["github-actions","travis"]
PR gated
Yes
Docs
Roxygen coverage
0%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
33.3%
Unsafe pattern score
0
Dep constraint coverage
16.7%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.0.0
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
22
First release
2015-10-13
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
4
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- not tracked
- Documented parameters
- not tracked
- Return-value docs
- not tracked
- References docs
- not tracked
Topics
Depended on by (5)
Bioconductor (5)
People
- Zuguang Gu author maintainer
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("EnrichedHeatmap")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.