CBEA
Bioc removedCompetitive Balances for Taxonomic Enrichment Analysis in R
Release Lineage
Entered 3.15 · Apr 27, 2022
Removed after 3.21 · Apr 16, 2025
Description
This package implements CBEA, a method to perform set-based analysis for microbiome relative abundance data. This approach constructs a competitive balance between taxa within the set and remainder taxa per sample. More details can be found in the Nguyen et al. 2021+ manuscript. Additionally, this package adds support functions to help users perform taxa-set enrichment analyses using existing gene set analysis methods. In the future we hope to also provide curated knowledge driven taxa sets.
None published for Bioconductor
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- Quang Nguyen author maintainer
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