Packages

366 packages on Bioconductor tagged GraphAndNetwork or AffymetrixChip, most distinct IPs first

GraphAndNetwork and AffymetrixChip in Topics

Package	Maintainer	Category	Latest version	Distinct IPs a month	Needs
graph graph: A package to handle graph data structuresBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	25,655	7
GSEABase Gene set enrichment data structures and methodsBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	13,344	46
Rgraphviz Provides plotting capabilities for R graph objectsKasper Daniel Hansen	Kasper Daniel Hansen	software	28 Apr 2026	11,263	10
RBGL An interface to the BOOST graph libraryBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	10,698	9
hgu133plus2.db Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data (chip hgu133plus2)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	4,227	43
GOstats Tools for manipulating GO and microarraysBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	2,437	63
hgu133a.db Affymetrix Affymetrix HG-U133A Array annotation data (chip hgu133a)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,996	43
hgu133plus2cdf hgu133plus2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,618	42
hgu95av2.db Affymetrix Affymetrix HG_U95Av2 Array annotation data (chip hgu95av2)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,605	43
hugene10sttranscriptcluster.db Affymetrix hugene10 annotation data (chip hugene10sttranscriptcluster)Biocore Package Maintainer	Biocore Package Maintainer	annotation	no date on record	1,302	43
hgu95av2cdf hgu95av2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,217	42
hgu95av2probe Probe sequence data for microarrays of type hgu95av2Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,164	42
goProfiles goProfiles: an R package for the statistical analysis of functional profilesAlex Sanchez	Alex Sanchez	software	28 Apr 2026	1,065	47
mouse4302.db Affymetrix Affymetrix Mouse430_2 Array annotation data (chip mouse4302)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,058	43
biocGraph Graph examples and use cases in BioinformaticsFlorian Hahne	Florian Hahne	software	28 Apr 2026	1,035	51
GraphAT Graph Theoretic Association TestsThomas LaFramboise	Thomas LaFramboise	software	28 Apr 2026	1,023	21
apComplex Estimate protein complex membership using AP-MS protein dataDenise Scholtens	Denise Scholtens	software	28 Apr 2026	1,009	48
hgu133acdf hgu133acdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	971	42
mouse4302cdf mouse4302cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	944	42
hgu133aprobe Probe sequence data for microarrays of type hgu133aBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	939	42
hypergraph A package providing hypergraph data structuresBioconductor Package Maintainer	Bioconductor Package Maintainer	software	28 Apr 2026	933	8
drosophila2probe Probe sequence data for microarrays of type drosophila2Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	921	42
pathRender Render molecular pathwaysVince Carey	Vince Carey	software	28 Apr 2026	898	47
hgu219.db Affymetrix Human Genome 219 Plate annotation data (chip hgu219)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	879	43
BioMVCClass Model-View-Controller (MVC) Classes That Use BiobaseElizabeth Whalen	Elizabeth Whalen	software	28 Apr 2026	878	13
MVCClass Model-View-Controller (MVC) ClassesElizabeth Whalen	Elizabeth Whalen	software	28 Apr 2026	860	1
SBMLR SBML-R Interface and Analysis ToolsTomas Radivoyevitch	Tomas Radivoyevitch	software	28 Apr 2026	834	7
hgu95a.db Affymetrix Affymetrix HG_U95A Array annotation data (chip hgu95a)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	809	43
rsbml R support for SBML, using libsbmlMichael Lawrence	Michael Lawrence	software	28 Apr 2026	711	8
hgu133a2.db Affymetrix Affymetrix HG-U133A_2 Array annotation data (chip hgu133a2)Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	687	43