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Topic: ExpressionData or StatisticalMethod

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111 packages on Bioconductor tagged ExpressionData or StatisticalMethod, most distinct IPs first

ExpressionData and StatisticalMethod in Topics

PackageMaintainerCategoryLatest versionDistinct IPs a monthNeeds
clusterProfiler
A Universal Enrichment Tool for Interpreting Omics DataGuangchuang Yu		Guangchuang Yusoftware19 Oct 202629,661138
celldex
Index of Reference Cell Type DatasetsAaron Lun		Aaron Lunexperiment5 May 20265,71795
ConsensusClusterPlus
ConsensusClusterPlusMatt Wilkerson		Matt Wilkersonsoftware28 Apr 20263,96510
celda
CEllular Latent Dirichlet AllocationJoshua Campbell		Joshua Campbellsoftware28 Apr 20262,337127
ChemmineR
Cheminformatics Toolkit for RThomas Girke		Thomas Girkesoftware28 Apr 20261,85465
Cardinal
A mass spectrometry imaging toolbox for statistical analysisKylie Ariel Bemis		Kylie Ariel Bemissoftware28 Apr 20261,40531
CATALYST
Cytometry dATa anALYSis ToolsHelena L. Crowell		Helena L. Crowellsoftware28 Apr 20261,265176
CRImage
CRImage a package to classify cells and calculate tumour cellularityHenrik Failmezger		Henrik Failmezgersoftware28 Apr 20261,20262
ClassifyR
A framework for cross-validated classification problems, with applications to differential variability and differential distribution testingDario Strbenac		Dario Strbenacsoftware28 Apr 20261,189147
CoreGx
Classes and Functions to Serve as the Basis for Other 'Gx' PackagesBenjamin Haibe-Kains		Benjamin Haibe-Kainssoftware28 Apr 20261,156127
clusterExperiment
Compare Clusterings for Single-Cell SequencingElizabeth Purdom		Elizabeth Purdomsoftware28 Apr 20261,150147
cancerclass
Development and validation of diagnostic tests from high-dimensional molecular dataDaniel Kosztyla		Daniel Kosztylasoftware28 Apr 20261,1138
CAGEr
Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome miningCharles Plessy		Charles Plessysoftware28 Apr 20261,109174
cogena
co-expressed gene-set enrichment analysisZhilong Jia		Zhilong Jiasoftware28 Apr 20261,090144
cola
A Framework for Consensus PartitioningZuguang Gu		Zuguang Gusoftware28 Apr 20261,08063
cicero
Predict cis-co-accessibility from single-cell chromatin accessibility dataHannah Pliner		Hannah Plinersoftware28 Apr 20261,077179
ChemmineOB
R interface to a subset of OpenBabel functionalitiesThomas Girke		Thomas Girkesoftware28 Apr 20261,0478
CellNOptR
Training of boolean logic models of signalling networks using prior knowledge networks and perturbation dataAttila Gabor		Attila Gaborsoftware28 Apr 20261,04462
CMA
Synthesis of microarray-based classificationRoman Hornung		Roman Hornungsoftware28 Apr 20261,0397
chipenrich
Gene Set Enrichment For ChIP-seq Peak DataKai Wang		Kai Wangsoftware28 Apr 2026997158
ctc
Cluster and Tree Conversion.Antoine Lucas		Antoine Lucassoftware28 Apr 20269791
COCOA
Coordinate Covariation AnalysisJohn Lawson		John Lawsonsoftware28 Apr 2026965126
CoGAPS
Coordinated Gene Activity in Pattern SetsElana J. Fertig		Elana J. Fertigsoftware28 Apr 202695994
ChromSCape
Analysis of single-cell epigenomics datasets with a Shiny AppPacome Prompsy		Pacome Prompsysoftware28 Apr 2026955203
CEMiTool
Co-expression Modules identification ToolHelder Nakaya		Helder Nakayasoftware20 Oct 2026950198
cpvSNP
Gene set analysis methods for SNP association p-values that lie in genes in given gene setsCaitlin McHugh		Caitlin McHughsoftware28 Apr 202693392
consensusOV
Gene expression-based subtype classification for high-grade serous ovarian cancerBenjamin Haibe-Kains		Benjamin Haibe-Kainssoftware28 Apr 2026930155
CONFESS
Cell OrderiNg by FluorEScence SignalDiana LOW		Diana LOWsoftware28 Apr 2026917152
CeTF
Coexpression for Transcription Factors using Regulatory Impact Factors and Partial Correlation and Information Theory analysisCarlos Alberto Oliveira de Biagi Junior		Carlos Alberto Oliveira de Biagi Juniorsoftware28 Apr 2026895228
clusterStab
Compute cluster stability scores for microarray dataJames W. MacDonald		James W. MacDonaldsoftware28 Apr 20268947