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ConsensusClusterPlus

Bioc current

ConsensusClusterPlus

v1.76.0 · software · GPL version 2

Release Lineage

Entered 2.6 · Apr 23, 2010

Current · Requires R 4.6

1.0 In 33 of 49 releases 3.23

Description

algorithm for determining cluster count and membership by stability evidence in unsupervised analysis

Test coverage

Line coverage

Expression

Tests / Examples

Functions

11 2 exported

Complexity

9.8 avg / 34 max

Call network

11 nodes / 11 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,040

Files

7

Compiled share

0%

Has compiled src

No

Language breakdown

R 666 (64%)Docs 117 (11.3%)Vignettes 257 (24.7%)

API

Exported functions

2

Internal functions

9

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL version 2

License flags

not SPDX, not OSI

History

Versions

33

First release

2010-05-13

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

1

LOC over versions

v2.6: 547 LOCv2.7: 545 LOCv2.8: 554 LOCv2.9: 554 LOCv2.10: 554 LOCv2.11: 554 LOCv2.12: 782 LOCv2.13: 782 LOCv2.14: 1,037 LOCv3.0: 1,037 LOCv3.1: 1,037 LOCv3.2: 1,037 LOCv3.3: 1,041 LOCv3.4: 1,041 LOCv3.5: 1,041 LOCv3.6: 1,041 LOCv3.7: 1,041 LOCv3.8: 1,041 LOCv3.9: 1,041 LOCv3.10: 1,041 LOCv3.11: 1,040 LOCv3.12: 1,040 LOCv3.13: 1,040 LOCv3.14: 1,040 LOCv3.15: 1,040 LOCv3.16: 1,040 LOCv3.17: 1,040 LOCv3.18: 1,040 LOCv3.19: 1,040 LOCv3.20: 1,040 LOCv3.21: 1,040 LOCv3.22: 1,040 LOCv3.23: 1,040 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
100%

Topics

Depended on by (17)

CRAN (5)

People

Matt Wilkerson

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ConsensusClusterPlus")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ConsensusClusterPlus version 1.76.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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