Packages
31 packages on Bioconductor tagged AffymetrixChip or Homo_sapiens or DNAMethylation, most distinct IPs first
AffymetrixChip, Homo_sapiens and DNAMethylation in Topics
| Package | Maintainer | Category | Latest version | Distinct IPs a month | Needs |
|---|---|---|---|---|---|
| BSgenome.Hsapiens.UCSC.hg38 Full genomic sequences for Homo sapiens (UCSC genome hg38)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 4,989 | 60 |
| bumphunter Bump HunterTamilselvi Guharaj | Tamilselvi Guharaj | software | 28 Apr 2026 | 4,268 | 83 |
| BSgenome.Hsapiens.UCSC.hg19 Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 2,842 | 58 |
| bsseq Analyze, manage and store whole-genome methylation dataKasper Daniel Hansen | Kasper Daniel Hansen | software | 28 Apr 2026 | 2,718 | 89 |
| BEAT BEAT - BS-Seq Epimutation Analysis ToolkitKemal Akman | Kemal Akman | software | 28 Apr 2026 | 1,069 | 70 |
| BiSeq Processing and analyzing bisulfite sequencing dataKatja Hebestreit | Katja Hebestreit | software | 28 Apr 2026 | 1,051 | 89 |
| BSgenome.Hsapiens.NCBI.GRCh38 Full genome sequences for Homo sapiens (GRCh38)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,017 | 58 |
| biscuiteer Convenience Functions for BiscuitJacob Morrison | Jacob Morrison | software | 28 Apr 2026 | 990 | 177 |
| bigmelon Illumina methylation array analysis for large experimentsLeonard C. Schalkwyk | Leonard C. Schalkwyk | software | 28 Apr 2026 | 898 | 174 |
| BSgenome.Hsapiens.UCSC.hg18 Full genome sequences for Homo sapiens (UCSC version hg18)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 888 | 58 |
| BEclear Correction of batch effects in DNA methylation dataLivia Rasp | Livia Rasp | software | 28 Apr 2026 | 746 | 31 |
| borealis Bisulfite-seq OutlieR mEthylation At singLe-sIte reSolutionGarrett Jenkinson | Garrett Jenkinson | software | 28 Apr 2026 | 620 | 117 |
| BPRMeth Model higher-order methylation profilesChantriolnt-Andreas Kapourani | Chantriolnt-Andreas Kapourani | software | no date on record | 606 | |
| betaHMM A Hidden Markov Model Approach for Identifying Differentially Methylated Sites and Regions for Beta-Valued DNA Methylation DataKoyel Majumdar | Koyel Majumdar | software | 28 Apr 2026 | 584 | 61 |
| BSgenome.Hsapiens.1000genomes.hs37d5 1000genomes Reference Genome Sequence (hs37d5)Julian Gehring | Julian Gehring | annotation | no date on record | 486 | 58 |
| BSgenome.Hsapiens.UCSC.hg38.masked Full masked genomic sequences for Homo sapiens (UCSC version hg38)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 476 | 61 |
| BSgenome.Hsapiens.UCSC.hg19.masked Full masked genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 461 | 59 |
| bovineprobe Probe sequence data for microarrays of type bovineBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 333 | 42 |
| barley1probe Probe sequence data for microarrays of type barley1Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 327 | 42 |
| bovine.db Affymetrix Affymetrix Bovine Array annotation data (chip bovine)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 312 | 43 |
| barley1cdf barley1cdfBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 302 | 42 |
| bovinecdf bovinecdfBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 301 | 42 |
| bsubtilisprobe Probe sequence data for microarrays of type bsubtilisBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 257 | 42 |
| bsubtiliscdf bsubtiliscdfBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 252 | 42 |
| BSgenome.Hsapiens.UCSC.hg17 Full genome sequences for Homo sapiens (UCSC version hg17)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 213 | 58 |
| BSgenome.Hsapiens.UCSC.hg18.masked Full masked genome sequences for Homo sapiens (UCSC version hg18)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 162 | 59 |
| BSgenome.Hsapiens.UCSC.hg17.masked Full masked genome sequences for Homo sapiens (UCSC version hg17)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 140 | 59 |
| BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 T2T-CHM13v2.0 assembly (Homo sapiens) wrapped in a BSgenome objectBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 107 | 58 |
| BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major Full genome sequences for Homo sapiens (UCSC version hg38, based on GRCh38.p12) with injected major alleles (dbSNP151)Jean-Philippe Fortin | Jean-Philippe Fortin | annotation | no date on record | 102 | 58 |
| BSgenome.Hsapiens.UCSC.hs1 Full genomic sequences for UCSC genome hs1 (Homo sapiens)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 101 | 58 |