R Observatory: Metrics for pbkrtest version 0.5.5

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

pbkrtest

0.5.5Package record

Parametric Bootstrap, Kenward-Roger and Satterthwaite Based Methods for Test in Mixed Models

13packages dependsuggested by 22

4.8Mdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Søren HøjsgaardCRAN page ↗Website ↗

Computes p-values based on (a) Satterthwaite or Kenward-Rogers degree of freedom methods and (b) parametric bootstrap for mixed effects models as implemented in the 'lme4' package. Implements parametric bootstrap test for generalized linear mixed models as implemented in 'lme4' and generalized linear models. The package is documented in the paper by Halekoh and Højsgaard, (2012, doi:10.18637/jss.v059.i09). Please see 'citation("pbkrtest")' for citation details.

Changes in 0.5.5

Changes:

Various updates preparing for new major release.

From NEWS in the release

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("pbkrtest", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-pbkrtest

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-pbkrtest

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-pbkrtest

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 4.5 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.5.5

READMEYes · 289 wordsVignettesYes · 2 · dynamicNEWSYes · 33% structured · mentions 0.5.5Citation fileYes · cites a publicationWebsiteYes

Description cites a JSS article

Help pages: 22 (4 internal)
Examples that run: 100%14 run in a plain check (1 of them under a condition)
Exported functions with examples: 80%
Documented parameters: 76%
Return-value docs: 53%
Help pages citing references: 45%

Vignettes (2)

How these are measured

Downloads

4.8M

CRAN downloads in the past year

Rank #159 · ~13K/day · ~396.9K/mo

Releases R versions

Daily download trend is not available in this view yet.

334.4K30 days

1.1M90 days

4.8M1 year

Compare downloads with other packages →

Also on69K r2u85 autocran132.1K conda_forge2.5K c2d4u

How downloads are counted

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Installing pbkrtest adds 52 packages (30 with compiled code, 52 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, doBy 4.3 MB.

Depends (2)

R >= 4.2.0lme4

Imports (7)

broom dplyrMASSmethodsnumDerivMatrixdoBy

LinkingTo (0)

none

Suggests (3)

nlmemarkdown knitr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

13direct

840indirect

Imports 13

Suggested by 22

Show all 35 packagesHide all 35 packages

Depends, Imports or LinkingTo, most downloaded first

car glmmTMB afex simr konfound r2glmm predictmeans agriTutorial MedianaDesigner replicateBE ComBatFamQC tukeytrend powerutilities

Suggests, most downloaded first

lme4 doBy insight emmeans lmerTest parameters effects broom.mixed modelbased jtools agridat lavaSearch2 buildmer asremlPlus RcmdrPlugin.NMBU grafify rfriend TukeyC SimplyAgree mlmoderator mixpower heritable

How these are counted

Code & Tests

Datasets

People & History

People (2)

Søren Højsgaard

Author, Maintainer, Copyright holder · added in 0.5-0.1

Ulrich Halekoh

Author, Copyright holder · added in 0.5-0.1

Maintainer since at least 0.4-7 (2017)

Listed in earlier versions (1)

Ulrich Halekoh Søren Højsgaard

no longer listed · 0.4-7 to 0.4-8.6

Releases (53)

Pick two releases to compare their code metrics.

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R 4.6.0 released · 2026-04-24
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R 4.5.0 released · 2025-04-11
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R 4.4.0 released · 2024-04-24
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R 3.6.0 released · 2019-04-26
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R 3.5.0 released · 2018-04-23
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get_nested_model_info
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pattern:^[^\\.]

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R 2.13.0 released · 2011-04-13

Package metadata

First published: 2011-10-22
Total releases: 53 / 15 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 4.2.0
Bundled data: 0.7 KB / 2 files
Download size: 76 KB

Appears in task views

Mixed, Multilevel, and Hierarchical Models in R

Cite

Cite this package

Run in R for the authors' entry:

citation("pbkrtest")

The package provides a citation file, so citation() returns the authors' own entry.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for pbkrtest version 0.5.5 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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