R Observatory: Metrics for jmBIG version 0.1.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

CRAN requires the check problems on this package to be fixed before Nov 10 or it will be archived. See the check details

jmBIG

0.1.3Package record

Joint Longitudinal and Survival Model for Big Data

1packages depend

2.6Kdownloads / year

–test coverage

4/13flavors OK

Overview

About

Maintained by Atanu BhattacharjeeCRAN page ↗

Provides analysis tools for big data where the sample size is very large. It offers a suite of functions for fitting and predicting joint models, which allow for the simultaneous analysis of longitudinal and time-to-event data. This statistical methodology is particularly useful in medical research where there is often interest in understanding the relationship between a longitudinal biomarker and a clinical outcome, such as survival or disease progression. This can be particularly useful in a clinical setting where it is important to be able to predict how a patient's health status may change over time. Overall, this package provides a comprehensive set of tools for joint modeling of BIG data obtained as survival and longitudinal outcomes with both Bayesian and non-Bayesian approaches. Its versatility and flexibility make it a valuable resource for researchers in many different fields, particularly in the medical and health sciences.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("jmBIG", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-jmbig

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-jmBIG

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-jmBIG

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

9ERROR4OK

Check messages

ERRORwhether package can be installedr-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-oldrel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

r-devel-linux-x86_64-debian-clang

Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/jmBIG.Rcheck/00install.out’ for details.

r-devel-linux-x86_64-debian-gcc

Installation failed.
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/jmBIG.Rcheck/00install.out’ for details.

r-devel-linux-x86_64-fedora-clang

Installation failed.
See ‘/data/localhost/ripley/R/packages/tests-clang/jmBIG.Rcheck/00install.out’ for details.

r-devel-linux-x86_64-fedora-gcc

Installation failed.
See ‘/data/localhost/ripley/R/packages/tests-devel/jmBIG.Rcheck/00install.out’ for details.

r-devel-windows-x86_64

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.7/jmBIG.Rcheck/00install.out' for details.

r-oldrel-windows-x86_64

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.5/jmBIG.Rcheck/00install.out' for details.

r-patched-linux-x86_64

Installation failed.
See ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/jmBIG.Rcheck/00install.out’ for details.

r-release-linux-x86_64

Installation failed.
See ‘/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/jmBIG.Rcheck/00install.out’ for details.

r-release-windows-x86_64

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/jmBIG.Rcheck/00install.out' for details.

CRAN check page ↗

Slowest check: 4.8 min · r-release-macos-x86_64

Status changes

ERROR4 OK, 9 ERRORNow
ERROR11 OK, 2 ERROR2026-10-20
OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-07-29
ERROR12 OK, 1 ERROR2026-07-27

Show 5 earlier changesHide 5 earlier changes

OK13 OK2026-06-09
ERROR12 OK, 1 ERROR2026-06-08
OK13 OK2026-05-02
ERROR11 OK, 1 ERROR2026-04-25
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.3

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 18
Examples that run: 0%15 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 22%

How these are measured

Downloads

2.6K

CRAN downloads in the past year

Rank #16,856 · ~7/day · ~217/mo

Releases R versions

Daily download trend is not available in this view yet.

25730 days

75990 days

2.6K1 year

Compare downloads with other packages →

Also on66 r2u4 autocran

How downloads are counted

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Installing jmBIG adds 210 packages (105 with compiled code, 200 MB of source tarballs). Heaviest: BH 14 MB, stringi 11 MB, TH.data 8.2 MB.

Depends (1)

R >= 2.10

Imports (8)

JMbayes2 joineRML rstanarm FastJM dplyrnlmesurvivalggplot2

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Imports 1

Depends, Imports or LinkingTo, most downloaded first

JMbdirect

How these are counted

Code & Tests

Datasets

People & History

People (3)

Atanu Bhattacharjee

Author, Maintainer since 0.1.0 (2023), Contributor

Bhrigu Kumar Rajbongshi

Author, Contributor

Gajendra K Vishwakarma

Author, Contributor

Releases (4)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.1.3Latest
record
2025-01-19 · current release · diff ↗ ·
removed 1 export
print
R
R 4.4.0 released · 2024-04-24
0.1.2
record
2024-03-21 · diff ↗ ·
added 2 exports
cisurvfitJMCS, plot_cisurvfitJMCS
0.1.1
record
2023-10-29 · diff ↗
0.1.0
record
2023-04-26
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-04-26
Total releases: 4 / 3 yrs
License: GPL-3 OSI
Minimum R: ≥ 2.10
Bundled data: 121 KB / 3 files
Download size: 137 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("jmBIG")

Format

Bhattacharjee, A., Rajbongshi, B. K., & Vishwakarma, G. K. (2025). jmBIG: Joint Longitudinal and Survival Model for Big Data (Version 0.1.3) [Computer software]. https://doi.org/10.32614/CRAN.package.jmBIG

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for jmBIG version 0.1.3 [Data set]. HJJB, LLC. Data release v2026-10-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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