R Observatory: Metrics for ecoregime version 0.4.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ecoregime

0.4.1

Analysis of Ecological Dynamic Regimes

0packages depend

2.9Kdownloads / year

94.9%test coverage

13/13checks pass

Overview

About

Maintained by Martina Sánchez-PinillosFirst published 2023-08-117 releasesCRAN page ↗GitHub ↗

A toolbox for implementing the Ecological Dynamic Regime framework, including functions to characterize and compare groups of ecological trajectories (Sánchez-Pinillos et al., 2023 doi:10.1002/ecm.1589); assess the ecological resilience of a disturbed system using a reference dynamic regime (Sánchez-Pinillos et al., 2024 doi:10.1016/j.biocon.2023.110409); and forecast ecological trajectories from a dynamic regime (Sánchez-Pinillos et al. 2026, doi:10.1111/2041-210x.70372). Additional functions are also available for visualizing ecological dynamic regimes, their representative trajectories, as well as predicted trajectories in a multidimensional state space.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ecoregime", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("MSPinillos/ecoregime")

Development version from MSPinillos/ecoregime. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ecoregime

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ecoregime

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ecoregime

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 20.8 min · r-devel-windows-x86_64

Code health

Yes

Tests · ratio 0.84

94.9%

Coverage · measured lines

100%

Documentation · exports

10

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-11
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-05-29
11 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE
OK2026-05-02
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 2 earlier snapshots

ERROR2026-04-25
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 390 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 64%

Downloads

2.9K

CRAN downloads in the past year

Rank #12,489 · ~8/day · ~239/mo

Releases R versions

Daily download trend is not available in this view yet.

21130 days

79990 days

2.9K1 year

Compare downloads with other packages →

Also on135 r2u18 autocran

Repository

GitHub ↗ mspinillos/ecoregime

10Stars

1Forks

0Open issues

0Open PRs

7Releases

335Commits

1Contributors

License GPL-2.0 · 335 commits · Last activity 2026-08-05 · +11.1% stars, 30d

Stars over time

2025-08-04 · 92026-08-18 · 10

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/mspinillos/ecoregime on 2026-08-16.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdrevdep/

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.4.0

Imports (10)

ape data.table ecotrajgraphicsgrDevicesmethodsshape smacofstatsstringr

LinkingTo (0)

none

Suggests (4)

knitr rmarkdown testthat vegan

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Martina Sánchez-Pinillos

Author, Maintainer, Copyright holder

Authors (1)

Martina Sánchez-Pinillos

Author, Maintainer, Copyright holder

Copyright holders (1)

Martina Sánchez-Pinillos

Author, Maintainer, Copyright holder

Package Timeline

7 releases. Pick two to compare their code metrics. R releases are shown for context.

0.4.1Latest
2026-08-05 · current release · diff ↗
0.3.1
2026-06-08 · diff ↗
R
R 4.6.0 released · 2026-04-24
0.3.0
2025-10-29 · diff ↗
0.2.1
2025-05-01 · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.2.0
2024-04-17 · diff ↗
0.1.3
2023-09-10 · diff ↗
0.1.2
2023-08-11
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-08-11
Total releases: 7 / 3 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.4.0
Bundled data: 76 KB / 1 file
Download size: 1.8 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ecoregime")

Format

Sánchez-Pinillos, M. (2026). ecoregime: Analysis of Ecological Dynamic Regimes (Version 0.4.1) [Computer software]. https://doi.org/10.32614/CRAN.package.ecoregime

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ecoregime version 0.4.1 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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