R Observatory: Metrics for clinify version 0.4.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

clinify

0.4.0

Clinical Table Styling Tools and Utilities

0packages depend

2.9Kdownloads / year

98.2%test coverage

13/13checks pass

Overview

About

Maintained by Mike StackhouseFirst published 2025-03-134 releasesCRAN page ↗

The primary motivation of this package is to take the things that are great about the R packages 'flextable' https://davidgohel.github.io/flextable/ and 'officer' https://davidgohel.github.io/officer/, take the standard and complex pieces of formatting clinical tables for regulatory use, and simplify the tedious pieces.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("clinify", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-clinify

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-clinify

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-clinify

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 7.5 min · r-oldrel-macos-x86_64

Code health

Yes

Tests · ratio 1.33

98.2%

Coverage · measured lines

100%

Documentation · exports

8

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-07-22
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-07-11
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 4 earlier snapshots

ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-06-04
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-03
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 411 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 0%

Downloads

2.9K

CRAN downloads in the past year

Rank #8,996 · ~8/day · ~244/mo

Releases R versions

Daily download trend is not available in this view yet.

29430 days

1K90 days

2.9K1 year

Compare downloads with other packages →

Also on119 r2u28 autocran726 conda_forge

Repository

GitHub ↗ atorus-research/clinify

6Stars

4Forks

12Open issues

0Open PRs

3Releases

317Commits

6Contributors

License Apache-2.0 · 317 commits · Last activity 2026-08-02

Stars over time

2025-05-07 · 62026-07-07 · 6

Repository practices

Upstream repositoryBeta

8 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/atorus-research/clinify on 2026-08-23.

Continuous integration (1)

GitHub Actions

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (3)

lintrVS CodeRStudio project

Show all practices

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Development tooling

AI-assisted toolingBeta

Uses AI-assisted development tooling (declared in repo)

Earliest detected marker: claude on 2026-06-02

claude

Most recent: claude on 2026-06-02

Evidence

claude: on or before 2026-06-02 · evidence B, D

How this is detected·Detection ruleset v2 (updated 2026-07-29)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.2

Imports (8)

flextable officer magrittr dplyr knitr htmltools tidyselect zoo

LinkingTo (0)

none

Suggests (6)

rmarkdown testthat Tplyr rvest withr xml2

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (7)

Maintainer (1)

Mike Stackhouse

Author, Maintainer

Authors (3)

Mike Stackhouse

Author, Maintainer

Yevhenii Boiko

Author

Ross Didenko

Author

Contributors (2)

Roman Rogoza

Contributor

Marat Zakirov

Contributor

Copyright holders (2)

Atorus Research, Inc.

Copyright holder

Incyte Corporation

Copyright holder

Package Timeline

4 releases. Pick two to compare their code metrics. R releases are shown for context.

0.4.0Latest
2026-08-02 · current release · diff ↗
0.3.1
2026-06-02 · diff ↗
R
R 4.6.0 released · 2026-04-24
0.3.0
2025-07-07 · diff ↗
R
R 4.5.0 released · 2025-04-11
0.1.2
2025-03-13
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2025-03-13
Total releases: 4 / 1 yrs
License: Apache License (>= 2)
Minimum R: ≥ 4.2
Download size: 1.2 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("clinify")

Format

Stackhouse, M., Atorus Research, Inc., Incyte Corporation, Boiko, Y., Didenko, R., Rogoza, R., & Zakirov, M. (2026). clinify: Clinical Table Styling Tools and Utilities (Version 0.4.0) [Computer software]. https://doi.org/10.32614/CRAN.package.clinify

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for clinify version 0.4.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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