R Observatory: Metrics for campsis version 1.9.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

campsis

1.9.0

Generic PK/PD Simulation Platform Campsis

0packages depend

7.3Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Nicolas LuyckxFirst published 2022-02-1616 releasesCRAN page ↗GitHub ↗

A generic, easy-to-use and intuitive pharmacokinetic/pharmacodynamic (PK/PD) simulation platform based on the R packages 'rxode2' and 'mrgsolve'. Campsis provides an abstraction layer over the underlying processes of defining a PK/PD model, assembling a custom dataset and running a simulation. The package has a strong dependency on the R package 'campsismod', which allows models to be read from and written to files, including through a JSON-based interface, and to be adapted further on the fly in the R environment. In addition, 'campsis' allows users to assemble datasets in an intuitive manner, including via a JSON-based interface to import Campsis datasets defined using formal JSON schemas distributed with the package. Once the dataset is ready, the package prepares the simulation, calls 'rxode2' or 'mrgsolve' (at the user's choice), and returns the results for the given model, dataset and desired simulation settings. The package itself is licensed under the GPL (>= 3); the JSON schema files shipped in inst/extdata are licensed separately under the Creative Commons Attribution 4.0 International (CC BY 4.0).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("campsis", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Calvagone/campsis")

Development version from Calvagone/campsis. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-campsis

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-campsis

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-campsis

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.7 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 2.89

not tracked

Coverage

100%

Documentation · exports

19

Dependencies · direct

Check history

OK2026-08-12
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-08-04
9 OK · 2 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE
NOTE2026-07-11
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Show 5 earlier snapshots

OK2026-05-07
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-05-06
12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
OK2026-05-02
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-25
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 87 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: not tracked
Documented parameters: 99%
Return-value docs: 100%
References docs: 0%

Downloads

7.3K

CRAN downloads in the past year

Rank #5,665 · ~20/day · ~610/mo

Releases R versions

Daily download trend is not available in this view yet.

25530 days

1.4K90 days

7.3K1 year

Compare downloads with other packages →

Also on172 r2u27 autocran

Repository

GitHub ↗ calvagone/campsis

11Stars

4Forks

7Open issues

0Open PRs

33Releases

730Commits

1Contributors

License GPL-3.0 · 730 commits · Last activity 2026-08-05 · 0% stars, 30d

Stars over time

2025-07-22 · 92026-07-07 · 11

Repository practices

Upstream repositoryBeta

8 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/calvagone/campsis on 2026-08-16.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Show all practices

Lint, format, editor (3)

AirVS CodeRStudio project

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

30 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.1.0campsismod

Imports (18)

assertthat digest dplyr furrr future ggplot2 jsonlite jsonvalidate lifecycleMASSmethodsprogressr purrr rlangstatstibble tidyr vctrs

LinkingTo (0)

none

Suggests (14)

bookdown devtools gridExtra knitr mrgsolve pkgdown rmarkdown roxygen2 rxode2 stringr testthat tictoc vdiffr xfun

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Nicolas Luyckx

Author, Maintainer

Authors (1)

Nicolas Luyckx

Author, Maintainer

Package Timeline

16 releases. Pick two to compare their code metrics. R releases are shown for context.

1.9.0Latest
2026-08-05 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
1.8.2
2026-03-19 · diff ↗
1.8.1
2026-01-28 · diff ↗
R
R 4.5.0 released · 2025-04-11
1.7.0
2025-04-04 · diff ↗
1.6.0
2025-02-09 · diff ↗
1.5.5
2024-11-26 · diff ↗
1.5.4
2024-08-30 · diff ↗
1.5.3
2024-07-01 · diff ↗
R
R 4.4.0 released · 2024-04-24
1.5.2
2024-04-12 · diff ↗
1.5.1
2024-02-16 · diff ↗
1.5.0
2023-10-13 · diff ↗
1.4.1
2023-04-24 · diff ↗
R
R 4.3.0 released · 2023-04-21

Show 12 earlier events

1.4.0
2023-04-13 · diff ↗
unarchivedReturned to CRAN
2023-04-13
archivedRemoved from CRAN
2023-04-01
check problems were not corrected in time
1.3.0
2022-06-01 · diff ↗
unarchivedReturned to CRAN
2022-06-01
archivedRemoved from CRAN
2022-05-24
check problems persisted after reinstatement
1.2.1
2022-05-03 · diff ↗
unarchivedReturned to CRAN
2022-05-03
archivedRemoved from CRAN
2022-04-22
check problems were not corrected in time
R
R 4.2.0 released · 2022-04-22
1.2.0
2022-02-16
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2022-02-16
Total releases: 16 / 4 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.1.0
Bundled data: 60 KB / 1 file
Download size: 527 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("campsis")

Format

Luyckx, N. (2026). campsis: Generic PK/PD Simulation Platform Campsis (Version 1.9.0) [Computer software]. https://doi.org/10.32614/CRAN.package.campsis

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for campsis version 1.9.0 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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