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allelematch

Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present

v2.5.5 · Jul 26, 2025 · GPL (>= 2)

Description

Tools for the identification of unique of multilocus genotypes when both genotyping error and missing data may be present; targeted for use with large datasets and databases containing multiple samples of each individual (a common situation in conservation genetics, particularly in non-invasive wildlife sampling applications). Functions explicitly incorporate missing data and can tolerate allele mismatches created by genotyping error. If you use this package, please cite the original publication in Molecular Ecology Resources (Galpern et al., 2012), the details for which can be generated using citation('allelematch'). For a complete vignette, please access via the Data S1 Supplementary documentation and tutorials (PDF) located at <doi:10.1111/j.1755-0998.2012.03137.x>.

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r-devel-linux-x86_64-debian-clang OK
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r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

imports

Dependency Network

Dependencies Reverse dependencies dynamicTreeCut amregtest allelematch

Version History

new 2.5.5 Mar 10, 2026
updated 2.5.5 ← 2.5.4 diff Jul 25, 2025
updated 2.5.4 ← 2.5.3 diff Mar 27, 2024
updated 2.5.3 ← 2.5.2 diff Aug 23, 2023
updated 2.5.2 ← 2.5.1 diff May 18, 2023
updated 2.5.1 ← 2.5 diff Apr 14, 2019
updated 2.5 ← 2.03 diff Sep 18, 2014
updated 2.03 ← 2.02 diff Jan 13, 2013
updated 2.02 ← 2.01 diff Feb 20, 2012
updated 2.01 ← 2.0 diff Jan 10, 2012
new 2.0 Oct 7, 2011