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Rtapas

Random Tanglegram Partitions

v1.2 · Jun 13, 2024 · MIT + file LICENSE

Description

Applies a given global-fit method to random partial tanglegrams of a fixed size to identify the associations, terminals, and nodes that maximize phylogenetic (in)congruence. It also includes functions to compute more easily the confidence intervals of classification metrics and plot results, reducing computational time. See Llaberia-Robledillo et al., (2023) <doi:10.1093/sysbio/syad016>.

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OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies phytools ape distory paco parallelly stringr vegan Rtapas

Version History

new 1.2 Mar 10, 2026
updated 1.2 ← 1.1 diff Jun 12, 2024
updated 1.1 ← 1.0 diff Sep 28, 2022
updated 1.0 ← 0.9 diff Sep 18, 2022
new 0.9 Jun 13, 2022