paco

Procrustes Application to Cophylogenetic Analysis

v0.4.2 · Aug 25, 2020 · MIT + file LICENSE

CRAN GitHub Mirror

Description

Procrustes analyses to infer co-phylogenetic matching between pairs of phylogenetic trees.

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CRAN Check Status

14 NOTE

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	27.8s
r-devel-linux-x86_64-debian-gcc	NOTE	22s
r-devel-linux-x86_64-fedora-clang	NOTE	42s
r-devel-linux-x86_64-fedora-gcc	NOTE	42.7s
r-devel-macos-arm64	NOTE	11s
r-devel-windows-x86_64	NOTE	47s
r-oldrel-macos-arm64	NOTE
r-oldrel-macos-x86_64	NOTE	23s
r-oldrel-windows-x86_64	NOTE	55s
r-patched-linux-x86_64	NOTE	25.2s
r-release-linux-x86_64	NOTE	24.5s
r-release-macos-arm64	NOTE
r-release-macos-x86_64	NOTE	38s
r-release-windows-x86_64	NOTE	49s

Check details (18 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Matthew Hutchinson <matthewhutchinson15@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Juan", "Antonio"),
                      family = "Balbuena",
                      role = "aut",
                      email = "j.a.balbuena@uv.es"),
               person(given = "Timothee",
                      family = "Poisot",
                      role = "aut",
                      email = "tim@poisotlab.io"),
               person(given = "Matthew",
                      family = "Hutchinson",
                      role = c("aut", "cre"),
                      email = "matthewhutchinson15@gmail.com"),
               person(given = c("Fernando", "Cagua;", "see", "PLoS", "ONE", "Balbuena", "et", "al", "2013"),
                      family = "<https://doi.org/10.1371/journal.pone.0061048>",
                      role = "aut",
                      email = "https://doi.org/10.1371/journal.pone.0061048"))
as necessary.

NOTE r-devel-linux-x86_64-debian-clang

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Matthew Hutchinson <matthewhutchinson15@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Juan", "Antonio"),
                      family = "Balbuena",
                      role = "aut",
                      email = "j.a.balbuena@uv.es"),
               person(given = "Timothee",
                      family = "Poisot",
                      role = "aut",
                      email = "tim@poisotlab.io"),
               person(given = "Matthew",
                      family = "Hutchinson",
                      role = c("aut", "cre"),
                      email = "matthewhutchinson15@gmail.com"),
               person(given = c("Fernando", "Cagua;", "see", "PLoS", "ONE", "Balbuena", "et", "al", "2013"),
                      family = "<https://doi.org/10.1371/journal.pone.0061048>",
                      role = "aut",
                      email = "https://doi.org/10.1371/journal.pone.0061048"))
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-devel-linux-x86_64-fedora-clang

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: ‘ape’
  All declared Imports should be used.

NOTE r-devel-linux-x86_64-fedora-gcc

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: ‘ape’
  All declared Imports should be used.

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

Check History

NOTE 0 OK · 14 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Matthew Hutchinson <matthewhutchinson15@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Juan", "Antonio"),
                      family = "Balbuena",
                      role =
...[truncated]...
 "ONE", "Balbuena", "et", "al", "2013"),
                      family = "<https://doi.org/10.1371/journal.pone.0061048>",
                      role = "aut",
                      email = "https://doi.org/10.1371/journal.pone.0061048"))
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Matthew Hutchinson <matthewhutchinson15@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = c("Juan", "Antonio"),
                      family = "Balbuena",
                      role =
...[truncated]...
 "ONE", "Balbuena", "et", "al", "2013"),
                      family = "<https://doi.org/10.1371/journal.pone.0061048>",
                      role = "aut",
                      email = "https://doi.org/10.1371/journal.pone.0061048"))
as necessary.

NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: ‘ape’
  All declared Imports should be used.

NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: ‘ape’
  All declared Imports should be used.

NOTE r-devel-macos-arm64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-devel-windows-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-patched-linux-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-linux-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-macos-arm64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-macos-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-release-windows-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-oldrel-macos-arm64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-oldrel-macos-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

NOTE r-oldrel-windows-x86_64

Rd files

checkRd: (-1) residuals_paco.Rd:10: Escaped LaTeX specials: \$

Reverse Dependencies (1)

imports

Rtapas

Dependency Network

Version History

new 0.4.2 Mar 10, 2026

updated 0.4.2 ← 0.4.1 diff Aug 24, 2020

updated 0.4.1 ← 0.4.0 diff May 19, 2019

updated 0.4.0 ← 0.3.2 diff May 11, 2019

updated 0.3.2 ← 0.3.1 diff Jul 15, 2017

updated 0.3.1 ← 0.3.0 diff Dec 4, 2016

updated 0.3.0 ← 0.2.3 diff Oct 2, 2016

updated 0.2.3 ← 0.2.2 diff Nov 9, 2015

updated 0.2.2 ← 0.2.1 diff Oct 9, 2015

new 0.2.1 Jul 17, 2015