PeakSegDisk

Disk-Based Constrained Change-Point Detection

v2024.10.1 · Oct 1, 2024 · GPL-3

Description

Disk-based implementation of Functional Pruning Optimal Partitioning with up-down constraints <doi:10.18637/jss.v101.i10> for single-sample peak calling (independently for each sample and genomic problem), can handle huge data sets (10^7 or more).

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CRAN Check Status

14 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	117.9s
r-devel-linux-x86_64-debian-gcc	OK	92.1s
r-devel-linux-x86_64-fedora-clang	OK	219.5s
r-devel-linux-x86_64-fedora-gcc	OK	202.7s
r-devel-macos-arm64	OK	45s
r-devel-windows-x86_64	OK	204s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	163s
r-oldrel-windows-x86_64	OK	233s
r-patched-linux-x86_64	OK	110.7s
r-release-linux-x86_64	OK	108.7s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	150s
r-release-windows-x86_64	OK	204s

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

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Version History

new 2024.10.1 Mar 10, 2026

updated 2024.10.1 ← 2023.11.27 diff Oct 1, 2024

updated 2023.11.27 ← 2023.9.4 diff Nov 27, 2023

updated 2023.9.4 ← 2022.2.1 diff Sep 5, 2023

updated 2022.2.1 ← 2020.8.13 diff Feb 1, 2022

updated 2020.8.13 ← 2019.9.27 diff Aug 13, 2020

updated 2019.9.27 ← 2019.9.10 diff Nov 18, 2019

updated 2019.9.10 ← 2019.7.29 diff Sep 10, 2019

updated 2019.7.29 ← 2018.11.28 diff Jul 30, 2019

new 2018.11.28 Dec 2, 2018