BGData
A Suite of Packages for Analysis of Big Genomic Data
Description
An umbrella package providing a phenotype/genotype data structure and scalable and efficient computational methods for large genomic datasets in combination with several other packages: 'BEDMatrix', 'LinkedMatrix', and 'symDMatrix'.
Downloads
388
Last 30 days
11188th
996
Last 90 days
4.7K
Last year
Trend: +24.8% (30d vs prior 30d)
32
Last 30 days
126
Last 90 days
463
Last year
Trend: -20% (30d vs prior 30d)
8
Last 7 days
55
Last 30 days
2
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
Code
Structure
Lines of code
4,326
Files
71
Compiled share
12.7%
Has compiled src
Yes
Language breakdown
API
Exported functions
23
Internal functions
39
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.68
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
62.5%
\dontrun example ratio
0%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
Yes
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
40%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.0.2
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
7
First release
2017-05-11
Latest release
2023-03-22
Avg cadence
449 days
Cold removal rate
100%
Dep drift
2
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.