Cytometry21
Cytometry21 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
254,450 × 11
Missing
0
Format
rda · bzip2
version 3 · 3.5 MB
File
data/Cytometry21.RData
Fingerprint
7f1a7fb4
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger6,2970-1579 – 8877mean 2638
Min.
-1579
1st Qu.
2283
Median
2563
Mean
2638.29
3rd Qu.
2845
Max.
8877
Std. dev
749.823
Skewness
2.223
Kurtosis
8.642
Zeros
1
Outliers
17,8355773 low · 12062 high
CD4+CD20:PB-A LOGICALinteger7,0430-2222 – 10948mean 3573
Min.
-2222
1st Qu.
3091
Median
3534
Mean
3573.15
3rd Qu.
4025
Max.
10948
Std. dev
900.58
Skewness
0.124
Kurtosis
1.99
Outliers
13,9376535 low · 7402 high
CD3:APC-A LOGICALinteger7,5340-1429 – 11722mean 3818
Min.
-1429
1st Qu.
2907
Median
3362
Mean
3818.46
3rd Qu.
3965
Max.
11722
Std. dev
1627.12
Skewness
0.9123
Kurtosis
-0.0499
Outliers
55,9366125 low · 49811 high
CD38:APC H7-A LOGICALinteger7,3530-2648 – 9824mean 3737
Min.
-2648
1st Qu.
3208
Median
3657
Mean
3736.95
3rd Qu.
4235
Max.
9824
Std. dev
1112.6
Skewness
-0.0287
Kurtosis
0.8602
Outliers
22,54711319 low · 11228 high
CD45:PO-A LOGICALinteger5,6820-918 – 9283mean 5017
Min.
-918
1st Qu.
4966
Median
5117
Mean
5016.72
3rd Qu.
5284
Max.
9283
Std. dev
657.236
Skewness
-3.502
Kurtosis
14.87
Outliers
21,21216418 low · 4794 high
CD5:PerCP Cy5-5-A LOGICALinteger6,6740-1856 – 9480mean 2874
Min.
-1856
1st Qu.
2406
Median
2859
Mean
2874.04
3rd Qu.
3281
Max.
9480
Std. dev
859.802
Skewness
0.4714
Kurtosis
2.001
Zeros
1
Outliers
14,9474411 low · 10536 high
CD56+IgK:PE-A LOGICALinteger7,4590-1258 – 9815mean 3184
Min.
-1258
1st Qu.
2193
Median
2687
Mean
3183.88
3rd Qu.
3500
Max.
9815
Std. dev
1517.68
Skewness
1.106
Kurtosis
0.1502
Zeros
3
Outliers
39,924254 low · 39670 high
CD8+IgL:FITC-A LOGICALinteger7,2170-2131 – 9963mean 3957
Min.
-2131
1st Qu.
3537
Median
3952
Mean
3957.12
3rd Qu.
4376
Max.
9963
Std. dev
1096.3
Skewness
-0.0551
Kurtosis
1.261
Outliers
43,48519771 low · 23714 high
FSC-A LINEARinteger7,5760-1973 – 13545mean 3303
Min.
-1973
1st Qu.
2055
Median
3614
Mean
3302.81
3rd Qu.
4318
Max.
13545
Std. dev
1324.6
Skewness
-0.204
Kurtosis
-0.4228
Zeros
8
Outliers
4303 low · 427 high
SSC-A Exp-SSC Lowinteger8,8650-1962 – 12845mean 4037
Min.
-1962
1st Qu.
1533
Median
5044
Mean
4036.74
3rd Qu.
5691
Max.
12845
Std. dev
2087.66
Skewness
-0.3975
Kurtosis
-1.377
Zeros
4
Outliers
10 low · 1 high
Population ID (name)factor320Neutrophils142,894CD4+CD8-25,324CD8+CD4-20,409Monocytes16,882other type of Debris14,262CD56dim8,313+26 more
Neutrophils142,894CD4+CD8-25,324CD8+CD4-20,409Monocytes16,882other type of Debris14,262CD56dim8,313+26 more
Levels
32
Used
32
Rows per level
Neutrophils142,894CD4+CD8-25,324CD8+CD4-20,409Monocytes16,882other type of Debris14,262CD56dim8,313Eosinophils6,830Mature SIg Kappa4,116Mature SIg Lambda3,216Neutrophils (U.S.)1,617Basophils1,575Monocytoid DC1,467TCRgd+1,288doublets T cells933TCRgd-827debris neutrophils642doublets neutrophils602doublets eosinophils537Plasmocytoid DC494CD56bright411CD4+CD8dim329debris T cells314doublets monocytes293Myeloid DC274debris B cells188debris axis119doublets axis119doublets B cells87PLASMA CELLS50debris NK cells27other type of Doublets8debris eosinophils3
Same structure in 7 other datasets
These datasets share the same columns and types but hold different data.
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.22 | 2025-10-29 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.21 | 2025-04-15 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.20 | 2024-10-29 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.19 | 2024-04-30 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.18 | 2023-10-24 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.17 | 2023-04-25 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.16 | 2022-11-01 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.15 | 2022-04-26 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.14 | 2021-10-26 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.13 | 2021-05-19 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.12 | 2020-10-27 | 254,450 × 11 | Unchanged | rda · bzip2 version 3 · 3.5 MB | exact |
| 3.11 | 2020-04-27 | 254,450 × 11 | – | rda · bzip2 version 3 · 3.5 MB | exact |