Cytometry16
Cytometry16 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
49,999 × 11
Missing
0
Format
rda · bzip2
version 3 · 721 KB
File
data/Cytometry16.RData
Fingerprint
b2027b51
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger3,3200-3748 – 8853mean 2576
Min.
-3748
1st Qu.
2273
Median
2477
Mean
2576.1
3rd Qu.
2692
Max.
8853
Std. dev
717.203
Skewness
3.791
Kurtosis
18.17
Outliers
2,495620 low · 1875 high
CD4+CD20:PB-A LOGICALinteger5,2140-1971 – 8528mean 3182
Min.
-1971
1st Qu.
2591
Median
3137
Mean
3181.58
3rd Qu.
3621
Max.
8528
Std. dev
917.643
Skewness
0.4194
Kurtosis
1.544
Zeros
17
Outliers
1,895552 low · 1343 high
CD3:APC-A LOGICALinteger5,8750-1575 – 8318mean 3289
Min.
-1575
1st Qu.
2303
Median
3002
Mean
3289.17
3rd Qu.
3585
Max.
8318
Std. dev
1721.18
Skewness
1.107
Kurtosis
0.7445
Outliers
7,462506 low · 6956 high
CD38:APC H7-A LOGICALinteger5,8500-2010 – 9133mean 3267
Min.
-2010
1st Qu.
2609
Median
3191
Mean
3266.56
3rd Qu.
3684
Max.
9133
Std. dev
1205.07
Skewness
0.7246
Kurtosis
1.101
Outliers
5,516793 low · 4723 high
CD45:PO-A LOGICALinteger5,0370-418 – 7673mean 4240
Min.
-418
1st Qu.
4195.5
Median
4618
Mean
4240.25
3rd Qu.
5044
Max.
7673
Std. dev
1241.52
Skewness
-1.213
Kurtosis
0.3549
Outliers
9,7689720 low · 48 high
CD5:PerCP Cy5-5-A LOGICALinteger5,4530-1743 – 10542mean 2823
Min.
-1743
1st Qu.
2145
Median
2787
Mean
2823.11
3rd Qu.
3303
Max.
10542
Std. dev
1006.56
Skewness
0.8759
Kurtosis
2.335
Outliers
1,564101 low · 1463 high
CD56+IgK:PE-A LOGICALinteger5,4000-719 – 11781mean 2890
Min.
-719
1st Qu.
2178
Median
2468
Mean
2890.25
3rd Qu.
2857
Max.
11781
Std. dev
1264.4
Skewness
1.742
Kurtosis
2.084
Outliers
7,874207 low · 7667 high
CD8+IgL:FITC-A LOGICALinteger5,7920-923 – 9354mean 3604
Min.
-923
1st Qu.
2897.5
Median
3550
Mean
3603.82
3rd Qu.
4031
Max.
9354
Std. dev
1161.45
Skewness
0.588
Kurtosis
0.5101
Outliers
3,786229 low · 3557 high
FSC-A LINEARinteger5,3510-2700 – 10770mean 2661
Min.
-2700
1st Qu.
1644
Median
3216
Mean
2660.87
3rd Qu.
3755
Max.
10770
Std. dev
1380.58
Skewness
-0.4324
Kurtosis
-0.7287
Zeros
9
Outliers
9719 low · 78 high
SSC-A Exp-SSC Lowinteger7,1860-2435 – 9955mean 3834
Min.
-2435
1st Qu.
1259
Median
4925
Mean
3833.79
3rd Qu.
6060
Max.
9955
Std. dev
2416.51
Skewness
-0.166
Kurtosis
-1.697
Zeros
4
Population ID (name)factor290Neutrophils22,802other type of Debris10,282Monocytes3,601CD4+CD8-3,358CD8+CD4-2,918Eosinophils1,347+23 more
Neutrophils22,802other type of Debris10,282Monocytes3,601CD4+CD8-3,358CD8+CD4-2,918Eosinophils1,347+23 more
Levels
29
Used
29
Rows per level
Neutrophils22,802other type of Debris10,282Monocytes3,601CD4+CD8-3,358CD8+CD4-2,918Eosinophils1,347debris neutrophils1,143CD56dim881Mature SIg Kappa652doublets neutrophils601Mature SIg Lambda484Monocytoid DC425TCRgd+246Basophils216TCRgd-184doublets T cells135CD56bright119debris T cells107doublets eosinophils106Plasmocytoid DC89PLASMA CELLS58debris axis55CD4+CD8dim49Myeloid DC45doublets monocytes28doublets B cells27doublets axis17doublets NK cells17other type of Doublets7
Same structure in 7 other datasets
These datasets share the same columns and types but hold different data.
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.22 | 2025-10-29 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.21 | 2025-04-15 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.20 | 2024-10-29 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.19 | 2024-04-30 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.18 | 2023-10-24 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.17 | 2023-04-25 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.16 | 2022-11-01 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.15 | 2022-04-26 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.14 | 2021-10-26 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.13 | 2021-05-19 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.12 | 2020-10-27 | 49,999 × 11 | Unchanged | rda · bzip2 version 3 · 721 KB | exact |
| 3.11 | 2020-04-27 | 49,999 × 11 | – | rda · bzip2 version 3 · 721 KB | exact |