Cytometry14
Cytometry14 %% ~~ data name/kind ... ~~
Bundled with optimalFlowData · exported, loads via data()
Class
data.frame
Dimensions
154,882 × 11
Missing
0
Format
rda · bzip2
version 3 · 2.1 MB
File
data/Cytometry14.RData
Fingerprint
04e94677
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
CD19/TCRgd:PE Cy7-A LOGICALinteger5,9930-1259 – 11824mean 2924
Min.
-1259
1st Qu.
2440
Median
2709
Mean
2923.62
3rd Qu.
3009
Max.
11824
Std. dev
948.007
Skewness
2.191
Kurtosis
5.81
Outliers
19,0701804 low · 17266 high
CD4+CD20:PB-A LOGICALinteger6,0580-1833 – 14235mean 3417
Min.
-1833
1st Qu.
2716
Median
3121
Mean
3416.6
3rd Qu.
4099
Max.
14235
Std. dev
1008.75
Skewness
0.9488
Kurtosis
1.529
Outliers
1,515116 low · 1399 high
CD3:APC-A LOGICALinteger6,7360-370 – 11294mean 3967
Min.
-370
1st Qu.
3019
Median
3462
Mean
3966.78
3rd Qu.
4251
Max.
11294
Std. dev
1604.23
Skewness
0.9578
Kurtosis
-0.1136
Outliers
30,9141120 low · 29794 high
CD38:APC H7-A LOGICALinteger6,8220-1157 – 12377mean 4075
Min.
-1157
1st Qu.
3468
Median
3951
Mean
4074.87
3rd Qu.
4932
Max.
12377
Std. dev
1199.98
Skewness
-0.1759
Kurtosis
0.1167
Outliers
2,1771871 low · 306 high
CD45:PO-A LOGICALinteger5,0150267 – 11625mean 4733
Min.
267
1st Qu.
4405
Median
4673
Mean
4733.34
3rd Qu.
5270
Max.
11625
Std. dev
720.439
Skewness
-1.721
Kurtosis
7.337
Outliers
5,7285408 low · 320 high
CD5:PerCP Cy5-5-A LOGICALinteger6,5120-1391 – 11102mean 4677
Min.
-1391
1st Qu.
4216
Median
4714
Mean
4677.1
3rd Qu.
5507
Max.
11102
Std. dev
1185.3
Skewness
-0.3496
Kurtosis
-0.0319
Outliers
5,3504891 low · 459 high
CD56+IgK:PE-A LOGICALinteger6,5700-403 – 10328mean 3566
Min.
-403
1st Qu.
2603
Median
3073
Mean
3565.53
3rd Qu.
4246
Max.
10328
Std. dev
1368.94
Skewness
0.9519
Kurtosis
-0.1126
Outliers
1,96018 low · 1942 high
CD8+IgL:FITC-A LOGICALinteger5,9240-1336 – 10811mean 4487
Min.
-1336
1st Qu.
4115
Median
4475
Mean
4487.43
3rd Qu.
5118
Max.
10811
Std. dev
1075.61
Skewness
-0.3837
Kurtosis
0.3409
Outliers
14,37613078 low · 1298 high
FSC-A LINEARinteger5,9120-3327 – 10746mean 2597
Min.
-3327
1st Qu.
1872
Median
2798
Mean
2597.31
3rd Qu.
3254
Max.
10746
Std. dev
912.787
Skewness
0.0106
Kurtosis
2.089
Zeros
4
Outliers
1,215408 low · 807 high
SSC-A Exp-SSC Lowinteger8,4900-2419 – 13259mean 3942
Min.
-2419
1st Qu.
1502
Median
4849
Mean
3941.65
3rd Qu.
5803
Max.
13259
Std. dev
2139.65
Skewness
-0.1775
Kurtosis
-1.506
Zeros
1
Outliers
10 low · 1 high
Population ID (name)factor340Neutrophils60,762CD4+CD8-18,666Monocytes17,873debris neutrophils17,001CD56dim9,333CD8+CD4-7,575+28 more
Neutrophils60,762CD4+CD8-18,666Monocytes17,873debris neutrophils17,001CD56dim9,333CD8+CD4-7,575+28 more
Levels
34
Used
34
Rows per level
Neutrophils60,762CD4+CD8-18,666Monocytes17,873debris neutrophils17,001CD56dim9,333CD8+CD4-7,575debris RBC5,458Eosinophils2,855Monocytoid DC2,129TCRgd+2,122Mature SIg Kappa2,112Mature SIg Lambda1,370debris monocytes1,320Basophils1,044doublets eosinophils1,008other type of Debris816debris axis623doublets T cells480other type of Doublets437TCRgd-291CD56bright248debris eosinophils211CD4+CD8dim207doublets neutrophils203Myeloid DC147Plasmocytoid DC147debris T cells145debris NK cells83debris B cells61PLASMA CELLS61doublets monocytes49doublets B cells16CD4+CD8+15doublets axis14
Same structure in 7 other datasets
These datasets share the same columns and types but hold different data.
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.22 | 2025-10-29 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.21 | 2025-04-15 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.20 | 2024-10-29 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.19 | 2024-04-30 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.18 | 2023-10-24 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.17 | 2023-04-25 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.16 | 2022-11-01 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.15 | 2022-04-26 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.14 | 2021-10-26 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.13 | 2021-05-19 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.12 | 2020-10-27 | 154,882 × 11 | Unchanged | rda · bzip2 version 3 · 2.1 MB | exact |
| 3.11 | 2020-04-27 | 154,882 × 11 | – | rda · bzip2 version 3 · 2.1 MB | exact |