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SBS_v34_signatures

Bundled with maftools · provided in inst/extdata, read by path with system.file()

Class
list
Elements
2
Missing
0
Format
rds · gzip
version 3 · 59 KB
File
inst/extdata/SBS_v34_signatures.RDs
Fingerprint
8fb16955
About this object
A list with no shape constraintsRows of cells of visibly different widths, one below the next, with nothing lining them up and nothing in them, and under them a small block with a header band: an element of a list can be another structure. There is no common length, so there is no row count.list

R's general-purpose container. Elements can be any type and any size. R object catalogue

Structure
Distinct
2
Nesting depth
2
Element length
1 – 86
Total length
87
Nested rows
182
Nested columns
86
Nested schema
varies between elements
Elements
Element
Type
Distinct
Missing
Summary
db
list
86
0
numeric·96 rows nested
Element class
numeric
Element length
96 – 96
Total length
8,256
Nested rows
96
What is inside it
Element
Type
Distinct
Missing
Summary
SBS1
numeric
83
0
2.23e-16 – 0.3651mean 0.0104
Min.
2.23e-16
1st Qu.
0.0001
Median
0.0003
Mean
0.0104
3rd Qu.
0.0014
Max.
0.3651
Std. dev
0.0483
Skewness
5.616
Kurtosis
33.21
Outliers
120 low · 12 high
SBS2
numeric
78
0
2.23e-16 – 0.536mean 0.0104
Min.
2.23e-16
1st Qu.
0
Median
0.0001
Mean
0.0104
3rd Qu.
0.0002
Max.
0.536
Std. dev
0.0631
Skewness
7.049
Kurtosis
51.77
Outliers
120 low · 12 high
SBS3
numeric
89
0
0.0003 – 0.0253mean 0.0104
Min.
0.0003
1st Qu.
0.0063
Median
0.0102
Mean
0.0104
3rd Qu.
0.0141
Max.
0.0253
Std. dev
0.006
Skewness
0.3308
Kurtosis
-0.5219
SBS4
numeric
96
0
0.0002 – 0.0807mean 0.0104
Min.
0.0002
1st Qu.
0.0018
Median
0.0042
Mean
0.0104
3rd Qu.
0.011
Max.
0.0807
Std. dev
0.0159
Skewness
2.686
Kurtosis
7.561
Outliers
120 low · 12 high
SBS5
numeric
91
0
0.0015 – 0.0462mean 0.0104
Min.
0.0015
1st Qu.
0.0048
Median
0.0076
Mean
0.0104
3rd Qu.
0.0135
Max.
0.0462
Std. dev
0.0084
Skewness
1.812
Kurtosis
3.985
Outliers
40 low · 4 high
SBS6
numeric
93
0
2.22e-16 – 0.1781mean 0.0104
Min.
2.22e-16
1st Qu.
0.0002
Median
0.0005
Mean
0.0104
3rd Qu.
0.0019
Max.
0.1781
Std. dev
0.0301
Skewness
3.599
Kurtosis
13.08
Outliers
180 low · 18 high
SBS7a
numeric
88
0
2.23e-16 – 0.3312mean 0.0104
Min.
2.23e-16
1st Qu.
0.0001
Median
0.0002
Mean
0.0104
3rd Qu.
0.0006
Max.
0.3312
Std. dev
0.0438
Skewness
5.706
Kurtosis
34.78
Outliers
160 low · 16 high
SBS7b
numeric
93
0
2.22e-16 – 0.2109mean 0.0104
Min.
2.22e-16
1st Qu.
0.0004
Median
0.0009
Mean
0.0104
3rd Qu.
0.0023
Max.
0.2109
Std. dev
0.0342
Skewness
4.254
Kurtosis
18.42
Outliers
160 low · 16 high
SBS7c
numeric
90
0
2.22e-16 – 0.279mean 0.0104
Min.
2.22e-16
1st Qu.
0.0005
Median
0.0024
Mean
0.0104
3rd Qu.
0.0097
Max.
0.279
Std. dev
0.0307
Skewness
7.224
Kurtosis
58.89
Outliers
70 low · 7 high
SBS7d
numeric
89
0
2.22e-16 – 0.318mean 0.0104
Min.
2.22e-16
1st Qu.
0.0002
Median
0.0013
Mean
0.0104
3rd Qu.
0.0056
Max.
0.318
Std. dev
0.0347
Skewness
7.37
Kurtosis
61.22
Outliers
160 low · 16 high
SBS8
numeric
93
0
2.22e-16 – 0.0478mean 0.0104
Min.
2.22e-16
1st Qu.
0.0016
Median
0.0046
Mean
0.0104
3rd Qu.
0.0151
Max.
0.0478
Std. dev
0.0127
Skewness
1.386
Kurtosis
0.7955
Outliers
70 low · 7 high
SBS9
numeric
93
0
0.0002 – 0.0657mean 0.0104
Min.
0.0002
1st Qu.
0.0028
Median
0.0065
Mean
0.0104
3rd Qu.
0.0129
Max.
0.0657
Std. dev
0.0127
Skewness
2.552
Kurtosis
7.12
Outliers
70 low · 7 high
SBS10a
numeric
78
0
2.23e-16 – 0.6701mean 0.0104
Min.
2.23e-16
1st Qu.
0
Median
0.0004
Mean
0.0104
3rd Qu.
0.0028
Max.
0.6701
Std. dev
0.0688
Skewness
9.186
Kurtosis
84.9
Outliers
120 low · 12 high
SBS10b
numeric
84
0
2.22e-16 – 0.437mean 0.0104
Min.
2.22e-16
1st Qu.
0.0001
Median
0.0005
Mean
0.0104
3rd Qu.
0.0031
Max.
0.437
Std. dev
0.0478
Skewness
7.663
Kurtosis
63.83
Outliers
150 low · 15 high
SBS10c
numeric
96
0
0 – 0.1888mean 0.0104
Min.
0
1st Qu.
0.0009
Median
0.0064
Mean
0.0104
3rd Qu.
0.0127
Max.
0.1888
Std. dev
0.0216
Skewness
6.271
Kurtosis
46.7
Outliers
40 low · 4 high
SBS10d
numeric
96
0
0 – 0.3419mean 0.0104
Min.
0
1st Qu.
0.0006
Median
0.0023
Mean
0.0104
3rd Qu.
0.006
Max.
0.3419
Std. dev
0.0433
Skewness
6.65
Kurtosis
44.2
Outliers
110 low · 11 high
SBS11
numeric
87
0
2.22e-16 – 0.1582mean 0.0104
Min.
2.22e-16
1st Qu.
0.0001
Median
0.0002
Mean
0.0104
3rd Qu.
0.0006
Max.
0.1582
Std. dev
0.0328
Skewness
3.268
Kurtosis
9.527
Outliers
140 low · 14 high
SBS12
numeric
93
0
0 – 0.0861mean 0.0104
Min.
0
1st Qu.
0.0006
Median
0.0017
Mean
0.0104
3rd Qu.
0.0052
Max.
0.0861
Std. dev
0.0202
Skewness
2.137
Kurtosis
3.358
Outliers
160 low · 16 high
SBS13
numeric
86
0
2.22e-16 – 0.369mean 0.0104
Min.
2.22e-16
1st Qu.
0.0001
Median
0.0003
Mean
0.0104
3rd Qu.
0.0014
Max.
0.369
Std. dev
0.0502
Skewness
6.208
Kurtosis
38.7
Outliers
160 low · 16 high
SBS14
numeric
89
0
2.22e-16 – 0.2601mean 0.0104
Min.
2.22e-16
1st Qu.
0.0002
Median
0.0014
Mean
0.0104
3rd Qu.
0.0064
Max.
0.2601
Std. dev
0.0337
Skewness
5.519
Kurtosis
33.35
Outliers
110 low · 11 high
SBS15
numeric
92
0
0 – 0.2771mean 0.0104
Min.
0
1st Qu.
0.0002
Median
0.001
Mean
0.0104
3rd Qu.
0.0059
Max.
0.2771
Std. dev
0.0335
Skewness
5.962
Kurtosis
41.15
Outliers
130 low · 13 high
SBS16
numeric
95
0
0.0001 – 0.2419mean 0.0104
Min.
0.0001
1st Qu.
0.0022
Median
0.0046
Mean
0.0104
3rd Qu.
0.0091
Max.
0.2419
Std. dev
0.0284
Skewness
6.593
Kurtosis
47
Outliers
60 low · 6 high
SBS17a
numeric
91
0
2.22e-16 – 0.4261mean 0.0104
Min.
2.22e-16
1st Qu.
0.0002
Median
0.0008
Mean
0.0104
3rd Qu.
0.0021
Max.
0.4261
Std. dev
0.0478
Skewness
7.304
Kurtosis
57.87
Outliers
170 low · 17 high
SBS17b
numeric
86
0
2.23e-16 – 0.55mean 0.0104
Min.
2.23e-16
1st Qu.
0.0001
Median
0.0003
Mean
0.0104
3rd Qu.
0.0012
Max.
0.55
Std. dev
0.0586
Skewness
8.255
Kurtosis
71.97
Outliers
140 low · 14 high
SBS18
numeric
91
0
0 – 0.1221mean 0.0104
Min.
0
1st Qu.
0.0019
Median
0.0032
Mean
0.0104
3rd Qu.
0.0084
Max.
0.1221
Std. dev
0.0208
Skewness
3.574
Kurtosis
13.36
Outliers
100 low · 10 high
SBS19
numeric
94
0
0 – 0.2579mean 0.0104
Min.
0
1st Qu.
0.0005
Median
0.0012
Mean
0.0104
3rd Qu.
0.0022
Max.
0.2579
Std. dev
0.0333
Skewness
5.158
Kurtosis
31.41
Outliers
130 low · 13 high
SBS20
numeric
88
0
2.22e-16 – 0.2521mean 0.0104
Min.
2.22e-16
1st Qu.
0.0002
Median
0.0027
Mean
0.0104
3rd Qu.
0.0107
Max.
0.2521
Std. dev
0.0287
Skewness
6.628
Kurtosis
50.78
Outliers
70 low · 7 high
SBS21
numeric
92
0
2.22e-16 – 0.223mean 0.0104
Min.
2.22e-16
1st Qu.
0.0001
Median
0.0007
Mean
0.0104
3rd Qu.
0.0042
Max.
0.223
Std. dev
0.0309
Skewness
4.691
Kurtosis
24.88
Outliers
150 low · 15 high
SBS22a
numeric
95
0
2.23e-16 – 0.168mean 0.0104
Min.
2.23e-16
1st Qu.
0.0004
Median
0.0013
Mean
0.0104
3rd Qu.
0.0044
Max.
0.168
Std. dev
0.0264
Skewness
3.716
Kurtosis
15.61
Outliers
130 low · 13 high
SBS22b
numeric
96
0
0.0004 – 0.1182mean 0.0104
Min.
0.0004
1st Qu.
0.0022
Median
0.0039
Mean
0.0104
3rd Qu.
0.0061
Max.
0.1182
Std. dev
0.0206
Skewness
3.591
Kurtosis
13.6
Outliers
150 low · 15 high
SBS23
numeric
86
0
1.83e-18 – 0.1891mean 0.0104
Min.
1.83e-18
1st Qu.
7.205e-18
Median
0.0002
Mean
0.0104
3rd Qu.
0.0005
Max.
0.1891
Std. dev
0.033
Skewness
3.84
Kurtosis
14.83
Outliers
170 low · 17 high
SBS24
numeric
90
0
0.0001 – 0.128mean 0.0104
Min.
0.0001
1st Qu.
0.0022
Median
0.0036
Mean
0.0104
3rd Qu.
0.0089
Max.
0.128
Std. dev
0.0183
Skewness
3.693
Kurtosis
17.36
Outliers
160 low · 16 high
SBS25
numeric
86
0
1.0e-18 – 0.0629mean 0.0104
Min.
1.0e-18
1st Qu.
0.0041
Median
0.0089
Mean
0.0104
3rd Qu.
0.0141
Max.
0.0629
Std. dev
0.0096
Skewness
2.32
Kurtosis
8.614
Outliers
40 low · 4 high
SBS26
numeric
93
0
0 – 0.0848mean 0.0104
Min.
0
1st Qu.
0.0007
Median
0.0016
Mean
0.0104
3rd Qu.
0.0054
Max.
0.0848
Std. dev
0.0208
Skewness
2.354
Kurtosis
4.431
Outliers
160 low · 16 high
SBS27
numeric
88
0
1.0e-18 – 0.3309mean 0.0104
Min.
1.0e-18
1st Qu.
0.0012
Median
0.0027
Mean
0.0104
3rd Qu.
0.0057
Max.
0.3309
Std. dev
0.038
Skewness
6.86
Kurtosis
51.5
Outliers
90 low · 9 high
SBS28
numeric
89
0
2.22e-16 – 0.4789mean 0.0104
Min.
2.22e-16
1st Qu.
0.0002
Median
0.0007
Mean
0.0104
3rd Qu.
0.0027
Max.
0.4789
Std. dev
0.0511
Skewness
8.181
Kurtosis
70.97
Outliers
150 low · 15 high
SBS29
numeric
91
0
3.61e-18 – 0.0971mean 0.0104
Min.
3.61e-18
1st Qu.
0.0009
Median
0.002
Mean
0.0104
3rd Qu.
0.0067
Max.
0.0971
Std. dev
0.02
Skewness
2.65
Kurtosis
6.76
Outliers
170 low · 17 high
SBS30
numeric
92
0
2.22e-16 – 0.134mean 0.0104
Min.
2.22e-16
1st Qu.
0.0002
Median
0.0005
Mean
0.0104
3rd Qu.
0.0011
Max.
0.134
Std. dev
0.0276
Skewness
2.956
Kurtosis
7.822
Outliers
180 low · 18 high
SBS31
numeric
94
0
0.0003 – 0.1639mean 0.0104
Min.
0.0003
1st Qu.
0.0025
Median
0.0051
Mean
0.0104
3rd Qu.
0.0094
Max.
0.1639
Std. dev
0.0224
Skewness
5.638
Kurtosis
33.63
Outliers
100 low · 10 high
SBS32
numeric
93
0
4.71e-18 – 0.152mean 0.0104
Min.
4.71e-18
1st Qu.
0.0007
Median
0.0012
Mean
0.0104
3rd Qu.
0.0094
Max.
0.152
Std. dev
0.0237
Skewness
3.909
Kurtosis
17.12
Outliers
120 low · 12 high
SBS33
numeric
92
0
0 – 0.3201mean 0.0104
Min.
0
1st Qu.
0.0008
Median
0.002
Mean
0.0104
3rd Qu.
0.0054
Max.
0.3201
Std. dev
0.0392
Skewness
6.513
Kurtosis
44.45
Outliers
120 low · 12 high
SBS34
numeric
84
0
2.22e-16 – 0.3159mean 0.0104
Min.
2.22e-16
1st Qu.
0.0001
Median
0.0006
Mean
0.0104
3rd Qu.
0.0028
Max.
0.3159
Std. dev
0.0436
Skewness
5.915
Kurtosis
35.64
Outliers
140 low · 14 high
SBS35
numeric
93
0
0.0001 – 0.0832mean 0.0104
Min.
0.0001
1st Qu.
0.0014
Median
0.0038
Mean
0.0104
3rd Qu.
0.0082
Max.
0.0832
Std. dev
0.0173
Skewness
2.565
Kurtosis
6.3
Outliers
160 low · 16 high
SBS36
numeric
95
0
0.0002 – 0.2079mean 0.0104
Min.
0.0002
1st Qu.
0.0011
Median
0.0022
Mean
0.0104
3rd Qu.
0.0054
Max.
0.2079
Std. dev
0.0286
Skewness
4.804
Kurtosis
26.03
Outliers
120 low · 12 high
SBS37
numeric
93
0
0.0003 – 0.0733mean 0.0104
Min.
0.0003
1st Qu.
0.0015
Median
0.0027
Mean
0.0104
3rd Qu.
0.0114
Max.
0.0733
Std. dev
0.0154
Skewness
2.03
Kurtosis
3.597
Outliers
130 low · 13 high
SBS38
numeric
91
0
0.0005 – 0.3808mean 0.0104
Min.
0.0005
1st Qu.
0.0014
Median
0.0023
Mean
0.0104
3rd Qu.
0.004
Max.
0.3808
Std. dev
0.0433
Skewness
7.207
Kurtosis
55.37
Outliers
120 low · 12 high
SBS39
numeric
90
0
0.0027 – 0.0507mean 0.0104
Min.
0.0027
1st Qu.
0.0054
Median
0.007
Mean
0.0104
3rd Qu.
0.0096
Max.
0.0507
Std. dev
0.0102
Skewness
2.432
Kurtosis
5.118
Outliers
120 low · 12 high
SBS40a
numeric
96
0
0.0006 – 0.0459mean 0.0104
Min.
0.0006
1st Qu.
0.0037
Median
0.0066
Mean
0.0104
3rd Qu.
0.0133
Max.
0.0459
Std. dev
0.0099
Skewness
1.56
Kurtosis
1.847
Outliers
90 low · 9 high
SBS40b
numeric
96
0
0.0008 – 0.0489mean 0.0104
Min.
0.0008
1st Qu.
0.0049
Median
0.0084
Mean
0.0104
3rd Qu.
0.0133
Max.
0.0489
Std. dev
0.0086
Skewness
2.007
Kurtosis
5.348
Outliers
50 low · 5 high
SBS40c
numeric
96
0
0.0008 – 0.0355mean 0.0104
Min.
0.0008
1st Qu.
0.0044
Median
0.0078
Mean
0.0104
3rd Qu.
0.0132
Max.
0.0355
Std. dev
0.0078
Skewness
1.081
Kurtosis
0.2646
Outliers
40 low · 4 high
aetiology
list
1
0
character·86 rows nested
Element class
character
Element length
86 – 86
Total length
86
Nested rows
86
What is inside it
Element
Type
Distinct
Missing
Summary
aetiology
character
32
0
7 – 53 characters

The nested tables do not share one set of columns, so there is no single schema to show.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-282 elementsUnchangedrds · gzip
version 3 · 59 KB
exact
3.222025-10-292 elementsUnchangedrds · gzip
version 3 · 59 KB
exact
3.212025-04-152 elementsUnchangedrds · gzip
version 3 · 59 KB
exact
3.202024-10-292 elements–rds · gzip
version 3 · 59 KB
exact

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