maftools
The data objects bundled with maftools, fingerprinted so you can see when the same data appears in more than one package.
31
Datasets
–
Found elsewhere
Datasets
Bundled datasets · 31
| Name | Class | Size | Also in |
|---|---|---|---|
| BP_SMGs | – | – | – |
| LAML_CBS_segments | – | – | – |
| LAML_sig_genes | data.frame | 18,253 × 19 | No other package |
| SBS_signatures | list | 2 elements | No other package |
| SBS_v34_signatures | list | 2 elements | No other package |
| TCGA.AB.3009.hg19.seg | data.frame | 818 × 6 | No other package |
| all_lesions.conf_99 | data.frame | 32 × 201 | No other package |
| amp_genes.conf_99 | data.frame | 39 × 6 | No other package |
| cancerhotspots_v2_GRCh37 | data.frame | 3,180 × 8 | No other package |
| cancerhotspots_v2_GRCh38 | data.frame | 3,180 × 8 | No other package |
| cancerhotspots_v2_hg19 | data.frame | 3,180 × 8 | No other package |
| cancerhotspots_v2_hg38 | data.frame | 3,180 × 8 | No other package |
| categories | data.frame | 20,075 × 4 | No other package |
| del_genes.conf_99 | data.frame | 1,004 × 14 | No other package |
| drugs | – | – | – |
| ensGenes | data.frame | 57,773 × 3 | No other package |
| hg19_cytobands | data.frame | 861 × 5 | No other package |
| hg19_smash_snps | – | – | – |
| hg38_cytobands | – | – | – |
| hg38_smash_snps | – | – | – |
| hugo_to_mutSigSymbol | data.frame | 1,300 × 2 | No other package |
| legacy_signatures | list | 2 elements | No other package |
| oncogenic_sig_patwhays | data.frame | 335 × 3 | No other package |
| pancan | data.frame | 260 × 2 | No other package |
| prot_len | data.frame | 18,251 × 4 | No other package |
| protein_domains | data.table | 92,849 × 12 | No other package |
| simple_somatic_mutation.open.ESCA-CN.sample | data.frame | 499 × 42 | No other package |
| tcga_cohort | – | – | – |
| tcga_laml_annot | data.frame | 200 × 4 | No other package |
| variants | data.frame | 10 × 6 | No other package |
| variants.hg19_multianno | data.frame | 10 × 11 | No other package |
24 of 31 data objects have a fingerprint to compare with. Nothing was measured about the other 7, so whether they appear elsewhere is unknown.