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sampleClassifierData

Bioc current

Pre-processed data for use with the sampleClassifier package

v1.36.0 · experiment · Artistic-2.0

Release Lineage

Entered 3.5 · Apr 25, 2017

Current · Requires R 4.6

1.0 In 19 of 49 releases 3.23

Description

This package contains two microarray and two RNA-seq datasets that have been preprocessed for use with the sampleClassifier package. The RNA-seq data are derived from Fagerberg et al. (2014) and the Illumina Body Map 2.0 data. The microarray data are derived from Roth et al. (2006) and Ge et al. (2005).

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

379

Files

17

Compiled share

0%

Has compiled src

No

Language breakdown

Docs 147 (38.8%)Vignettes 232 (61.2%)

API

Exported functions

0

Internal functions

0

Recent export changes

v3.5+1 pattern:.

Testing & CI

Has tests

No

Test-to-code ratio

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.4

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

19

First release

2017-08-16

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.5: 379 LOCv3.6: 379 LOCv3.7: 379 LOCv3.8: 379 LOCv3.9: 379 LOCv3.10: 379 LOCv3.11: 379 LOCv3.12: 379 LOCv3.13: 379 LOCv3.14: 379 LOCv3.15: 379 LOCv3.16: 379 LOCv3.17: 379 LOCv3.18: 379 LOCv3.19: 379 LOCv3.20: 379 LOCv3.21: 379 LOCv3.22: 379 LOCv3.23: 379 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (1)

Bioconductor (1)

People

Khadija El Amrani

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("sampleClassifierData")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for sampleClassifierData version 1.36.0 [Data set]. HJJB, LLC. Data release v2026-08-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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