geyser
Bioc currentGene Expression displaYer of SummarizedExperiment in R
Release Lineage
Entered 3.21 · Apr 16, 2025
Current · Requires R 4.6
Description
Lightweight Expression displaYer (plotter / viewer) of SummarizedExperiment object in R. This package provides a quick and easy Shiny-based GUI to empower a user to use a SummarizedExperiment object to view
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
14 1 exported
Complexity
10 avg / 51 max
Call network
14 nodes / 12 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
1,803
Files
38
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
1
Internal functions
13
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.06
testthat edition
3
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
4.2%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
CC0
License flags
SPDX valid, not OSI
History
Versions
3
First release
2025-04-15
Latest release
2026-04-28
Avg cadence
189 days
Cold removal rate
–
Dep drift
10
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 0%
Topics
People
- David McGaughey author maintainer