chihaya
Bioc currentSave Delayed Operations to a HDF5 File
Release Lineage
Entered 3.17 · Apr 26, 2023
Current · Requires R 4.6
Description
Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
61 12 exported
Complexity
3.7 avg / 23 max
Call network
61 nodes / 59 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,923
Files
88
Compiled share
5.8%
Has compiled src
Yes
Language breakdown
API
Exported functions
13
Internal functions
33
Testing
Has tests
Yes
Test-to-code ratio
0.61
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
2 externalC++17, GNU make
C++ standard
–
License
GPL-3
License flags
SPDX valid, OSI approved
History
Versions
7
First release
2023-04-25
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 19
- Examples that run
- 100%18 run in a plain check
- Exported functions with examples
- 86%
- Documented parameters
- 100%
- Return-value docs
- 100%
- Help pages citing references
- 0%
- User guide HTML
Repository practices
Checks run against github.com/artifactdb/chihaya-r on 2026-10-21.
No development-tooling practices detected in the upstream repository.
Topics
Suggested by (1)
People
- Aaron Lun maintainer author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("chihaya")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.