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brgedata

Bioc current

Exposures, Gene Expression and Methylation data for ilustration purpouses

v1.34.0 · experiment · MIT + file LICENSE

Release Lineage

Entered 3.6 · Oct 31, 2017

Current · Requires R 4.6

1.0 In 18 of 49 releases 3.23

Description

This package contains several sets of omics data including Gene Expression (ExpressionSet), Methylation (GenomicRatioSet), Proteome and Exposome (ExposomeSet). This data is used in vignettes and exaples at MEAL, MultiDataSet and omicRexposome.

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

255

Files

153

Compiled share

0%

Has compiled src

No

Language breakdown

R 51 (20%)Docs 96 (37.6%)Vignettes 108 (42.4%)

API

Exported functions

0

Internal functions

0

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.4

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

18

First release

2018-01-26

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.6: 255 LOCv3.7: 255 LOCv3.8: 255 LOCv3.9: 255 LOCv3.10: 255 LOCv3.11: 255 LOCv3.12: 255 LOCv3.13: 255 LOCv3.14: 255 LOCv3.15: 255 LOCv3.16: 255 LOCv3.17: 255 LOCv3.18: 255 LOCv3.19: 255 LOCv3.20: 255 LOCv3.21: 255 LOCv3.22: 255 LOCv3.23: 255 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (3)

Bioconductor (3)

People

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