ToPASeq
Bioc removedTopology-based pathway analysis of RNA-seq data
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Entered 3.0 · Oct 14, 2014
Removed after 3.13 · May 20, 2021
Description
Implementation of methods for topology-based pathway analysis of RNA-seq data. This includes Topological Analysis of Pathway Phenotype Association (TAPPA; Gao and Wang, 2007), PathWay Enrichment Analysis (PWEA; Hung et al., 2010), and the Pathway Regulation Score (PRS; Ibrahim et al., 2012).
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