TimiRGeN
Bioc removedTime sensitive microRNA-mRNA integration, analysis and network generation tool
Release Lineage
Entered 3.12 · Oct 28, 2020
Removed after 3.19 · May 1, 2024
Description
TimiRGeN (Time Incorporated miR-mRNA Generation of Networks) is a novel R package which functionally analyses and integrates time course miRNA-mRNA differential expression data. This tool can generate small networks within R or export results into cytoscape or pathvisio for more detailed network construction and hypothesis generation. This tool is created for researchers that wish to dive deep into time series multi-omic datasets. TimiRGeN goes further than many other tools in terms of data reduction. Here, potentially hundreds-of-thousands of potential miRNA-mRNA interactions can be whittled down into a handful of high confidence miRNA-mRNA interactions affecting a signalling pathway, across a time course.
None published for Bioconductor
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People
- Krutik Patel author maintainer
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