PanomiR

Description

PanomiR is a package to detect miRNAs that target groups of pathways from gene expression data. This package provides functionality for generating pathway activity profiles, determining differentially activated pathways between user-specified conditions, determining clusters of pathways via the PCxN package, and generating miRNAs targeting clusters of pathways. These function can be used separately or sequentially to analyze RNA-Seq data.

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Topics

People

• Pourya Naderi author maintainer
• Winston Hide author
• Ilya Sytchev author
• Yue Yang (Alan) Teo author