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MicroBioMap

Bioc removed

Access the microbiome compendium from R

v0.99.13 · MIT + file LICENSE
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Description

The MicroBioMap offers access to a dataset including over 160,000 samples of publicly available 16S rRNA amplicon sequencing data, all processed using the same pipeline and reference database. The main function of the package is to fetch the data and parse it into a TreeSummarizedExperiment. Basic documentation includes use cases and examples.

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Topics

Software › Technology › Sequencing › Microbiome
Software › ResearchField › Metagenomics
Software › Technology › Sequencing
Software › Infrastructure › DataImport

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