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MetaGxOvarian

Bioc current

Transcriptomic Ovarian Cancer Datasets

v1.32.0 · experiment · Artistic-2.0

Release Lineage

Entered 3.7 · May 1, 2018

Current · Requires R 4.6

1.0 In 17 of 49 releases 3.23

Description

A collection of Ovarian Cancer Transcriptomic Datasets that are part of the MetaGxData package compendium.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

2 2 exported

Complexity

24 avg / 29 max

Call network

2 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

10,045

Files

50

Compiled share

0%

Has compiled src

No

Language breakdown

R 363 (3.6%)Tests 24 (0.2%)Docs 9,481 (94.4%)Vignettes 177 (1.8%)

API

Exported functions

2

Internal functions

0

Recent export changes

v3.9+1 loadOvarianDatasets
v3.7+1 loadOvarianEsets

Testing & CI

Has tests

Yes

Test-to-code ratio

0.07

testthat edition

CI present

Yes

CI type

["github-actions"]

PR gated

Yes

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.6.0

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

17

First release

2018-04-30

Latest release

2026-04-28

Avg cadence

183 days

Cold removal rate

Dep drift

1

LOC over versions

v3.7: 9,792 LOCv3.8: 9,793 LOCv3.9: 10,001 LOCv3.10: 10,029 LOCv3.11: 10,029 LOCv3.12: 10,029 LOCv3.13: 10,029 LOCv3.14: 10,022 LOCv3.15: 10,022 LOCv3.16: 10,022 LOCv3.17: 10,022 LOCv3.18: 10,022 LOCv3.19: 10,022 LOCv3.20: 10,022 LOCv3.21: 10,022 LOCv3.22: 10,045 LOCv3.23: 10,045 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 27 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Topics

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