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MSstatsPTM

Bioc current

Statistical Characterization of Post-translational Modifications

v2.14.0 · software · Artistic-2.0
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.12 · Oct 28, 2020

Current · Requires R 4.6

1.0 In 12 of 49 releases 3.23

Description

MSstatsPTM provides general statistical methods for quantitative characterization of post-translational modifications (PTMs). Supports DDA, DIA, SRM, and tandem mass tag (TMT) labeling. Typically, the analysis involves the quantification of PTM sites (i.e., modified residues) and their corresponding proteins, as well as the integration of the quantification results. MSstatsPTM provides functions for summarization, estimation of PTM site abundance, and detection of changes in PTMs across experimental conditions.

Code

Code metrics have not been computed for this package yet.

Topics

Software › ResearchField › Immunology › ImmunoOncology
Software › Technology › MassSpectrometry
Software › ResearchField › Proteomics
Software
Software › BiologicalQuestion › DifferentialExpression
Software › Technology › Microarray › OneChannel
Software › Technology › Microarray › TwoChannel
Software › WorkflowStep › Normalization
Software › WorkflowStep › QualityControl

Depended on by (2)

Bioconductor (2)

MSstatsLiP MSstatsShiny

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