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ImageArray

Bioc current

A framework for on-disk and in-memory image arrays

v1.0.0 · Package record · software · MIT + file LICENSE

Release Lineage

Entered 3.23 · Apr 29, 2026

Current · Requires R 4.6

1.0 In 1 of 49 releases 3.23

Description

ImageArray provides a framework for on-disk and in-memory image arrays, specifically for pyramidal images stored in HDF5, Zarr and life sciences image file formats (OME Bio-Formats).

Advisories

None published for Bioconductor

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

28 7 exported

Complexity

4.4 avg / 16 max

Call network

28 nodes / 22 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

3,318

Files

40

Compiled share

0%

Has compiled src

No

Language breakdown

R 1,643 (49.5%)Tests 849 (25.6%)Docs 480 (14.5%)Vignettes 346 (10.4%)

API

Exported functions

7

Internal functions

21

Recent export changes

v3.23+7 BFArray, ImageArray, createImageArray +4 more

Testing

Has tests

Yes

Test-to-code ratio

0.52

testthat edition

3

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.5.0

System requirements

–

C++ standard

–

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

1

First release

2026-04-28

Latest release

2026-04-28

Avg cadence

–

Cold removal rate

–

Dep drift

0

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

In the Bioconductor 3.23 release
READMEYes · 329 wordsVignettesYes · 1 · dynamicNEWSYes · 0% structuredCitation fileNoWebsitenot declared in DESCRIPTION
Help pages
7
Examples that run
100%7 run in a plain check
Exported functions with examples
100%
Documented parameters
100%
Return-value docs
100%
Help pages citing references
0%
Vignettes (1)

Repository practices

Upstream repositoryBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/bimsbbioinfo/imagearray on 2026-10-22.

Continuous integration (1)
GitHub Actions
Docs source (1)
README.qmd
Lint, format, editor (1)
RStudio project
How this is detected·Detection ruleset v4 (2026-10-20)

Topics

Maintainer
Artür Manukyan

Available on

CRANr2uBioconductorautoCRANCOPR

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ImageArray")
Manukyan, A. (2026). ImageArray: A framework for on-disk and in-memory image arrays (Version 1.0.0) [Computer software]. https://bioconductor.org/packages/ImageArray

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ImageArray version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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