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GenomicSuperSignature

Bioc current

Interpretation of RNA-seq experiments through robust, efficient comparison to public databases

v1.20.0 · software · Artistic-2.0
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Release Lineage

Entered 3.13 · May 20, 2021

Current · Requires R 4.6

1.0 In 11 of 49 releases 3.23

Description

This package provides a novel method for interpreting new transcriptomic datasets through near-instantaneous comparison to public archives without high-performance computing requirements. Through the pre-computed index, users can identify public resources associated with their dataset such as gene sets, MeSH term, and publication. Functions to identify interpretable annotations and intuitive visualization options are implemented in this package.

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Topics

Software › ResearchField › Transcriptomics
Software › ResearchField › SystemsBiology
Software › StatisticalMethod › PrincipalComponent
Software › Technology › Sequencing › RNASeq
Software › Technology › Sequencing
Software › WorkflowStep › Pathways
Software › StatisticalMethod › Clustering

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